Amsterdam Infection and Immunity - Infection Diseases

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Review article
2020

Machine learning for the prediction of sepsis: a systematic review and meta-analysis of diagnostic test accuracy

Fleuren, L. M., Klausch, T. L. T., Zwager, C. L., Schoonmade, L. J., Guo, T., Roggeveen, L. F., Swart, E. L., Girbes, A. R. J., Thoral, P., Ercole, A., Hoogendoorn, M. & Elbers, P. W. G., 21 Jan 2020, In : Intensive Care Medicine. 46, 3, 18 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Proteinuria—take a closer look!

Bökenkamp, A., 2020, In : Pediatric Nephrology. 35, 4, 9 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Open Access

Treatment of hypercholesterolaemia in older adults calls for a patient-centred approach

Kleipool, E. E., Dorresteijn, J. A., Smulders, Y. M., Visseren, F. L., Peters, M. J. & Muller, M., 27 Jan 2020, In : Heart. 106, p. 261-266

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
2019

Balancing benefits and risks in the era of biologics

Adami, G., Saag, K. G., Chapurlat, R. D., Guañabens, N., Haugeberg, G., Lems, W. F., Matijevic, R., Peel, N., Poddubnyy, D. & Geusens, P., 1 Jan 2019, In : Therapeutic Advances in Musculoskeletal Disease. 11, 11.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

CKD: A Call for an Age-Adapted Definition

Delanaye, P., Jager, K. J., Bökenkamp, A., Christensson, A., Dubourg, L., Eriksen, B. O., Gaillard, F., Gambaro, G., van der Giet, M., Glassock, R. J., Indridason, O. S., van Londen, M., Mariat, C., Melsom, T., Moranne, O., Nordin, G., Palsson, R., Pottel, H., Rule, A. D., Schaeffner, E. & 4 others, Taal, M. W., White, C., Grubb, A. & van den Brand, J. A. J. G., 1 Jan 2019, In : Journal of the American Society of Nephrology. 30, 10, p. 1785-1805 21 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Common mechanisms and holistic care in atherosclerosis and osteoporosis 11 Medical and Health Sciences 1103 Clinical Sciences

Szekanecz, Z., Raterman, H. G., Petho, Z. & Lems, W. F., 2019, In : Arthritis Research and Therapy. 21, 1, 15.

Research output: Contribution to journalReview articleAcademicpeer-review

Current Treatments and New Developments in the Management of Glucocorticoid-induced Osteoporosis

Raterman, H. G., Bultink, I. E. M. & Lems, W. F., 2019, In : Drugs. 79, 10, p. 1065-1087

Research output: Contribution to journalReview articleAcademicpeer-review

Digital Learning to Improve Safe and Effective Prescribing: A Systematic Review

Bakkum, M. J., Tichelaar, J., Wellink, A., Richir, M. C. & van Agtmael, M. A., 1 Dec 2019, In : Clinical Pharmacology and Therapeutics. 106, 6, p. 1236-1245 10 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Early and late adverse renal effects after potentially nephrotoxic treatment for childhood cancer

Kooijmans, E. C. M., Bökenkamp, A., Tjahjadi, N. S., Tettero, J. M., van Dulmen-den Broeder, E., van der Pal, H. J. H. & Veening, M. A., 11 Mar 2019, In : Cochrane Database of Systematic Reviews. 2019, 3, CD008944.

Research output: Contribution to journalReview articleAcademicpeer-review

Enterovirus and parechovirus infections in children: Differences in clinical presentation, mechanisms for meningitis without pleocytosis and mechanisms involved in the neurological outcome

de Crom, SCM., van Hinsbergh, MT., van Beijsterveld, IA. & Tutu-van Furth, AM., 1 Apr 2019, In : Minerva pediatrica. 71, 2, p. 150-158 9 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Expiratory muscle dysfunction in critically ill patients: towards improved understanding

Shi, Z-H., Jonkman, A., de Vries, H., Jansen, D., Ottenheijm, C., Girbes, A., Spoelstra-de Man, A., Zhou, J-X., Brochard, L. & Heunks, L., 1 Aug 2019, In : Intensive Care Medicine. 45, 8, p. 1061-1071 11 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Fecal volatile organic compounds for early detection of colorectal cancer: where are we now?

Bosch, S., Berkhout, D. J., Ben Larbi, I., de Meij, T. G. & de Boer, N. K., 22 Jan 2019, In : Journal of Cancer Research and Clinical Oncology. 145, 1, p. 223-234

Research output: Contribution to journalReview articleAcademicpeer-review

Fracture prevention by screening for high fracture risk: a systematic review and meta-analysis

Merlijn, T., Swart, K. M. A., van der Horst, H. E., Netelenbos, J. C. & Elders, P. J. M., 1 Jan 2019, In : Osteoporosis International.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Function, essentiality, and expression of cytochrome P450 enzymes and their cognate redox partners in Mycobacterium tuberculosis: are they drug targets?

Ortega Ugalde, S., Boot, M., Commandeur, J. N. M., Jennings, P., Bitter, W. & Vos, J. C., 2019, In : Applied Microbiology and Biotechnology. 103, 9, p. 3597-3614

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Health professions digital education on antibiotic management: Systematic review and meta-analysis by the digital health education collaboration

Kyaw, B. M., Car, L. T., Galen, L. S. V., van Agtmael, M. A., Costelloe, C. I. E., Ajuebor, O., Campbell, J. & Car, J., 1 Jan 2019, In : Journal of Medical Internet Research. 21, 9, e14984.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Open Access

Infection control link nurses in acute care hospitals: A scoping review

Dekker, M., Jongerden, I. P., van Mansfeld, R., Ket, J. C. F., van der Werff, S. D., Vandenbroucke-Grauls, C. M. J. E. & de Bruijne, M. C., 1 Jan 2019, In : Antimicrobial Resistance and Infection Control. 8, 1, 20.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

In vivo imaging of TGFβ signalling components using positron emission tomography

Rotteveel, L., Poot, A. J., Bogaard, H. J., ten Dijke, P., Lammertsma, A. A. & Windhorst, A. D., Dec 2019, In : Drug Discovery Today. 24, 12, p. 2258-2272

Research output: Contribution to journalReview articleAcademicpeer-review

Is reaching 90-90-90 enough to end AIDS? Lessons from Amsterdam

de Bree, G. J., van Sighem, A., Zuilhof, W., van Bergen, J. E. A. M., Prins, M., Heidenrijk, M., van der Valk, M., Brokx, P., Reiss, P. & On behalf of the HIV Transmission Elimination AMsterdam (H-TEAM) initiative, Nov 2019, In : Current Opinion in HIV and AIDS. 14, 6, p. 455-463

Research output: Contribution to journalReview articleAcademicpeer-review

Microbial evolutionary medicine: from theory to clinical practice

Andersen, SB., Shapiro, J., Vandenbroucke-Grauls, CMJE., de Vos, MGJ. & Tutu-van Furth, AM., 1 Aug 2019, In : Lancet Infectious Diseases. 19, 8, p. e273-e283

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Outcome measures for adherence data from a medication event monitoring system: A literature review

Hartman, L., Lems, WF. & Boers, M., 1 Feb 2019, In : Journal of Clinical Pharmacy and Therapeutics. 44, 1, p. 1-5 5 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
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Perceived publication pressure in Amsterdam: Survey of all disciplinary fields and academic ranks

Haven, T. L., Bouter, L. M., Smulders, Y. M. & Tijdink, J. K., 1 Jun 2019, In : PLoS ONE. 14, 6, e0217931.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Pharmacological Management of Osteoporosis in Rheumatoid Arthritis Patients: A Review of the Literature and Practical Guide

Raterman, H. G. & Lems, W. F., 1 Dec 2019, In : Drugs and Aging. 36, 12, p. 1061-1072 12 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access
Open Access

Publication bias may exist among prognostic accuracy studies of middle cerebral artery Doppler ultrasound

Vollgraff Heidweiller-Schreurs, C. A., Korevaar, D. A., Mol, B. W. J., Bax, C. J., de Groot, C. J. M., de Boer, M. A. & Bossuyt, P. M. M., 1 Dec 2019, In : Journal of Clinical Epidemiology. 116, p. 1-8

Research output: Contribution to journalReview articleAcademicpeer-review

Systematic review with meta-analysis: risk factors for thiopurine-induced leukopenia in IBD

van Gennep, S., Konté, K., Meijer, B., Heymans, M. W., D’Haens, G. R., Löwenberg, M. & de Boer, N. K. H., 1 Jan 2019, In : Alimentary Pharmacology and Therapeutics. 50, 5, p. 484-506

Research output: Contribution to journalReview articleAcademicpeer-review

The dichotomous role of the glycolytic metabolism pathway in cancer metastasis: Interplay with the complex tumor microenvironment and novel therapeutic strategies

el Hassouni, B., Granchi, C., Vallés-Martí, A., Supadmanaba, I. G. P., Bononi, G., Tuccinardi, T., Funel, N., Jimenez, C. R., Peters, G. J., Giovannetti, E. & Minutolo, F., 21 Aug 2019, In : Seminars in Cancer Biology.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

The effect of HIV infection, antiretroviral therapy on carotid intima-media thickness: A systematic review and meta-analysis

Msoka, T. F., van Guilder, G. P., van Furth, M., Smulders, Y., Meek, S. J., Bartlett, J. A., Vissoci, J. R. N. & van Agtmael, M. A., 15 Oct 2019, In : Life Sciences. 235, 116851.

Research output: Contribution to journalReview articleAcademicpeer-review

The effect of leucovorin rescue therapy on methotrexate-induced oral mucositis in the treatment of paediatric ALL: A systematic review

van der Beek, J. N., Oosterom, N., Pieters, R., de Jonge, R., van den Heuvel-Eibrink, M. M. & Heil, S. G., 2019, In : Critical Reviews in Oncology/Hematology. 142, p. 1-8

Research output: Contribution to journalReview articleAcademicpeer-review

The prognostic accuracy of short term variation of fetal heart rate in early-onset fetal growth restriction: A systematic review

Pels, A., Mensing van Charante, N. A., Vollgraff Heidweiller-Schreurs, C. A., Limpens, J., Wolf, H., de Boer, M. A. & Ganzevoort, W., 1 Mar 2019, In : European Journal of Obstetrics and Gynecology and Reproductive Biology. 234, p. 179-184

Research output: Contribution to journalReview articleAcademicpeer-review

The relation of the vaginal microbiota to early pregnancy development during in vitro fertilization treatment—A meta-analysis

Singer, M., Borg, M., Ouburg, S. & Morré, S. A., 1 Apr 2019, In : Journal of Gynecology Obstetrics and Human Reproduction. 48, 4, p. 223-229

Research output: Contribution to journalReview articleAcademicpeer-review

Tumor microbiome: Pancreatic cancer and duodenal fluids contain multitudes, ...but do they contradict themselves?

Meijer, L. L., Zwart, E. S., Brandt, B. W., Mebius, R., Deng, D., Giovannetti, E., Zaura, E. & Kazemier, G., Dec 2019, In : Critical Reviews in Oncology/Hematology. 144

Research output: Contribution to journalReview articleAcademicpeer-review

2018

Advances, challenges, and opportunities in extracellular RNA biology: insights from the NIH exRNA Strategic Workshop

Li, K., Rodosthenous, R. S., Kashanchi, F., Gingeras, T., Gould, S. J., Kuo, L. S., Kurre, P., Lee, H., Leonard, J. N., Liu, H., Lombo, T. B., Momma, S., Nolan, J. P., Ochocinska, M. J., Pegtel, D. M., Sadovsky, Y., Sánchez-Madrid, F., Valdes, K. M., Vickers, K. C., Weaver, A. M. & 5 others, Witwer, K. W., Zeng, Y., Das, S., Raffai, R. L. & Howcroft, T. K., 2018, In : JCI Insight. 3, 7

Research output: Contribution to journalReview articleAcademicpeer-review

Application of fecal volatile organic compound analysis in clinical practice: Current state and future perspectives

el Hassani, S. E. M., Berkhout, D. J. C., Bosch, S., Benninga, M. A., de Boer, N. K. H. & de Meij, T. G. J., 2018, In : Chemosensors. 6, 3, 29.

Research output: Contribution to journalReview articleAcademicpeer-review

A proposal to create an extension to the European baseline series

Wilkinson, M., Gallo, R., Goossens, A., Johansen, J. D., Rustemeyer, T., Sánchez-Pérez, J., Schuttelaar, M. L. & Uter, W., 1 Feb 2018, In : Contact Dermatitis. 78, 2, p. 101-108 8 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Assessing breathing effort in mechanical ventilation: physiology and clinical implications

de Vries, H., Jonkman, A., Shi, Z-H., Spoelstra-de Man, A. & Heunks, L., Oct 2018, In : Annals of Translational Medicine. 6, 19, p. 387 1 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Baseline PET as prognostic marker for Hodgkin?

Zijlstra, J. M. & Boellaard, R., 4 Jan 2018, In : Blood. 131, 1, p. 3-4 2 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Biogenesis and function of extracellular vesicles in cancer

Bebelman, M. P., Smit, M. J., Pegtel, D. M. & Baglio, S. R., 1 Aug 2018, In : Pharmacology and Therapeutics. 188, p. 1-11 11 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

CD169+ Macrophages Capture and Dendritic Cells Instruct: The Interplay of the Gatekeeper and the General of the Immune System

Grabowska, J., Lopez-Venegas, M. A., Affandi, A. J. & den Haan, J. M. M., 2018, In : Frontiers in Immunology. 9, p. 2472

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Clinical utility of bone markers in various diseases

Vlot, M. C., den Heijer, M., de Jongh, R. T., Vervloet, M. G., Lems, W. F., de Jonge, R., Obermayer-Pietsch, B. & Heijboer, A. C., 1 Sep 2018, In : Bone. 114, p. 215-225 11 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Do final-year medical students have sufficient prescribing competencies? A systematic literature review

Brinkman, D. J., Tichelaar, J., Graaf, S., Otten, R. H. J., Richir, M. C. & van Agtmael, M. A., 8 Jan 2018, In : British Journal of Clinical Pharmacology. 84, 4, p. 615-635

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Effect of procalcitonin-guided antibiotic treatment on clinical outcomes in intensive care unit patients with infection and sepsis patients: A patient-level meta-analysis of randomized trials

Wirz, Y., Meier, M. A., Bouadma, L., Luyt, C. E., Wolff, M., Chastre, J., Tubach, F., Schroeder, S., Nobre, V., Annane, D., Reinhart, K., Damas, P., Nijsten, M., Shajiei, A., deLange, D. W., Deliberato, R. O., Oliveira, C. F., Shehabi, Y., van Oers, J. A. H., Beishuizen, A. & 4 others, Girbes, A. R. J., de Jong, E., Mueller, B. & Schuetz, P., 2018, In : Critical Care. 22, 1, 191.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Endogenous markers for kidney function in children: a review

den Bakker, E., Gemke, R. J. B. J. & Bökenkamp, A., 2018, In : Critical Reviews in Clinical Laboratory Sciences. 55, 3, p. 163-183

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Extracellular vesicles released in response to respiratory exposures: implications for chronic disease

Benedikter, B. J., Wouters, E. F. M., Savelkoul, P. H. M., Rohde, G. G. U. & Stassen, F. R. M., 2018, In : Journal of Toxicology and Environmental Health - Part B: Critical Reviews. 21, 3, p. 142-160

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

FDG-PET/CT(A) imaging in large vessel vasculitis and polymyalgia rheumatica: joint procedural recommendation of the EANM, SNMMI, and the PET Interest Group (PIG), and endorsed by the ASNC

Slart, R. H. J. A., Glaudemans, A. W. J. M., Chareonthaitawee, P., Treglia, G., Besson, F. L., Bley, T. A., Blockmans, D., Boellaard, R., Bucerius, J., Carril, J. M., Chen, W., Cid, M. C., Dagupta, B., Dorbala, S., Gheysens, O., Hyafil, F., Jain, S., Klink, T., van der Laken, C. J., Lomeña, F. & 31 others, Massollo, M., Prieto-González, S., Luqmani, R., Roivainen, A., Salvarani, C., Saraste, A., Schirmer, M., Verberne, H. J., Versari, A., Voskuyl, A. E., Walter, M. A., Camellino, D., Brouwer, E., Cimmino, M. A., Abidov, A., Agostini, D., Beanlands, R. S., Delgado-Bolton, R. C., Einstein, A. J., Gimelli, A., Miller, E. J., Sciagrà, R., Signore, A., Writing group, Reviewer group, Members of EANM Cardiovascular, Members of EANM Infection & Inflammation, Members of Committees, SNMMI Cardiovascular, Members of Council, PET Interest Group, Members of ASNC & EANM Committee Coordinator, 1 Jul 2018, In : European Journal of Nuclear Medicine and Molecular Imaging. 45, 7, p. 1250-1269 20 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Fitness to fly in the paediatric population, how to assess and advice

Israëls, J., Nagelkerke, A. F., Markhorst, D. G. & van Heerde, M., 2018, In : European Journal of Pediatrics. 177, 5, p. 633-639

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

From Carbon-11-Labeled Amino Acids to Peptides in Positron Emission Tomography: the Synthesis and Clinical Application

Pekošak, A., Filp, U., Poot, A. J. & Windhorst, A. D., 1 Aug 2018, In : Molecular Imaging and Biology. 20, 4, p. 510-532 23 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Glucocorticoids, Inflammation and Bone

Güler-Yüksel, M., Hoes, J. N., Bultink, I. E. M. & Lems, W. F., May 2018, In : Calcified Tissue International. 102, 5, p. 592-606 15 p.

Research output: Contribution to journalReview articleAcademicpeer-review