Amsterdam Neuroscience - Cellular and Molecular Mechanisms

Research Output

2007

Comparison of time and frequency domain measures of RSA in ambulatory recordings

Goedhart, A. D., Van Der Sluis, S., Houtveen, J. H., Willemsen, G. & De Geus, E. J. C., Mar 2007, In : Psychophysiology. 44, 2, p. 203-215 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Differences in the C13orf25 miRNA cluster in non-Hodgkin lymphoma and normal B-Cell subtypes

Robertus, J-L., Wang, M., Harms, G., Blokzijl, T., Schakel, R. N., de Jong, D., Reijmers, R. M., Pals, S. T., Rosati, S., Schuuring, E., Kluin, P. M. & van den Berg, A., 16 Nov 2007, In : Blood. 110, 11, p. 1049A-1049A

Research output: Contribution to journalArticleAcademicpeer-review

DNA copy number gains at loci of growth factors and their receptors in salivary gland adenoid cystic carcinoma

Vékony, H., Ylstra, B., Wilting, S. M., Meijer, G. A., van de Wiel, M. A., Leemans, C. R., van der Waal, I. & Bloemena, E., 1 Jun 2007, In : Clinical Cancer Research. 13, 11, p. 3133-9 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Effects of polymorphisms in folate-related genes on methotrexate sensitivity and risk of acute lymphoblastic leukemia

de Jonge, R., Tissing, W. J., van Zelst, B. D., Jansen, G., Kaspers, GJL., Peters, GJ., Pieters, R. & Lindemans, J., 2007, In: "Chemistry and Biology of Pteridines and Folates" . Jansen, G. & Peters, G. J. (eds.). SHS Publications, Heilbronn, Germany, p. 515-534 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

Executive functioning in children, and its relations with reasoning, reading, and arithmetic

van der Sluis, S., de Jong, P. F. & van der Leij, A., 1 Sep 2007, In : Intelligence. 35, 5, p. 427-449 23 p.

Research output: Contribution to journalArticleAcademicpeer-review

Flow cytometric CD34+ stem cell enumeration: Lessons from nine years' external quality assessment within the Benelux countries

Levering, W. H. B. M., Preijers, F. W. M. B., Van Wieringen, W. N., Kraan, J., Van Beers, W. A. M., Sintnicolaas, K., Van Rhenen, D. J. & Gratama, J. W., 15 May 2007, In : Cytometry Part B - Clinical Cytometry. 72, 3, p. 178-188 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Forkhead transcription factor FoxM1 regulates mitotic entry and prevents spindle defects in cerebellar granule neuron precursors

Schüller, U., Zhao, Q., Godinho, S. A., Heine, V. M., Medema, R. H., Pellman, D. & Rowitch, D. H., Dec 2007, In : Molecular and Cellular Biology. 27, 23, p. 8259-70 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Glucocorticoids decrease hippocampal and prefrontal activation during declarative memory retrieval in young men

Oei, N. Y. L., Elzinga, B. M., Wolf, O. T., de Ruiter, M. B., Damoiseaux, J. S., Kuijer, J. P. A., Veltman, D. J., Scheltens, P. & Rombouts, S. A. R. B., 1 Jun 2007, In : Brain Imaging and Behavior. 1, 1-2, p. 31-41 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Heritability of reproductive hormones in adult male twins

Kuijper, E. A. M., Lambalk, C. B., Boomsma, D. I., van der Sluis, S., Blankenstein, M. A., de Geus, E. J. C. & Posthuma, D., Aug 2007, In : Human Reproduction. 22, 8, p. 2153-2159 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer

Chin, S. F., Teschendorff, A. E., Marioni, J. C., Wang, Y., Barbosa-Morais, N. L., Thorne, N. P., Costa, J. L., Pinder, S. E., Van de Wiel, M. A., Green, A. R., Ellis, I. O., Porter, P. L., Tavaré, S., Brenton, J. D., Ylstra, B. & Caldas, C., 7 Oct 2007, In : Genome Biology. 8, 10, R215.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Homocysteine affects cardiomyocyte viability: concentration-dependent effects on reversible flip-flop, apoptosis and necrosis

Sipkens, J. A., Krijnen, P. A. J., Meischl, C., Cillessen, S. A. G. M., Smulders, Y. M., Smith, D. E. C., Giroth, C. P. E., Spreeuwenberg, M. D., Musters, R. J. P., Muller, A., Jakobs, C., Roos, D., Stehouwer, C. D. A., Rauwerda, J. A., van Hinsbergh, V. W. M. & Niessen, H. W. M., Aug 2007, In : Apoptosis. 12, 8, p. 1407-18 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

IFN-α-stimulated genes and Epstein-Barr virus gene expression distinguish WHO type II and III nasopharyngeal carcinomas

Pegtel, D. M., Subramanian, A., Meritt, D., Tsai, C. H., Sheen, T. S., Golub, T. R. & Thorley-Lawson, D. A., 15 Jan 2007, In : Cancer Research. 67, 2, p. 474-481 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Measurement system analysis for categorical measurements: Agreement and kappa-type indices

De Mast, J. & Van Wieringen, W. N., 1 Jan 2007, In : Journal of quality technology . 39, 3, p. 191-202 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

MicroRNAs specific for immune-privileged diffuse large B-cell lymphoma

Robertus, J., Harms, G., Blokzijl, T., de Jong, D., Booman, M., Rosati, S., Schuuring, E., Kluin, P. M. & van den Berg, A., 16 Nov 2007, In : Blood. 110, 11, p. 468A-468A

Research output: Contribution to journalArticleAcademicpeer-review

Normalized, segmented or called aCGH data?

Van Wieringen, W. N., Van De Wiel, M. A. & Ylstra, B., 1 Dec 2007, In : Cancer Informatics. 3, p. 321-327 7 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Pin1 levels are downregulated during ER stress in human neuroblastoma cells

Kap, Y. S., Hoozemans, J. J. M., Bodewes, A. J., Zwart, R., Meijer, O. C., Baas, F. & Scheper, W., Jan 2007, In : Neurogenetics. 8, 1, p. 21-7 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Pontocerebellar hypoplasia type 2: a neuropathological update

Barth, P. G., Aronica, E., de Vries, L. S., Nikkels, P. G. J., Scheper, W., Hoozemans, J. J., Poll-The, B-T. & Troost, D., Oct 2007, In : Acta Neuropathologica. 114, 4, p. 373-386

Research output: Contribution to journalArticleAcademicpeer-review

Profiling of apoptosis genes allows for clinical stratification of primary nodal diffuse large B-cell lymphomas

Muris, J. J. F., Ylstra, B., Cillessen, S. A. G. M., Ossenkoppele, G. J., Kluin-Nelemans, J. C., Eijk, P. P., Nota, B., Tijssen, M., De Boer, W. P. H., Van De Wiel, M., Van Den Ijssel, P. R. L. A., Jansen, P., De Bruin, P. C., Van Krieken, J. H. J. M., Meijer, G. A., Meijer, C. J. L. M. & Oudejans, J. J., 1 Jan 2007, In : British Journal of Haematology. 136, 1, p. 38-47 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Rab6 is increased in Alzheimer's disease brain and correlates with endoplasmic reticulum stress

Scheper, W., Hoozemans, J. J. M., Hoogenraad, C. C., Rozemuller, A. J. M., Eikelenboom, P. & Baas, F., Oct 2007, In : Neuropathology and Applied Neurobiology. 33, 5, p. 523-32 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

The involvement of aβ in the neuroinflammatory response

Eikelenboom, P., Van Gool, W. A., Rozemuller, A. J. M., Scheper, W., Veerhuis, R. & Hoozemans, J. J. M., 1 Dec 2007, Abeta Peptide and Alzheimer's Disease: Celebrating a Century of Research. Springer London, p. 52-82 31 p.

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

The role of Rab3a in secretory vesicle docking requires association/dissociation of guanidine phosphates and Munc18-1

van Weering, J. R. T., Toonen, R. F. & Verhage, M., 18 Jul 2007, In : PLoS ONE. 2, 7, e616.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Whole brain analysis of T2* weighted baseline FMRI signal in dementia

Rombouts, S. A. R. B., Scheltens, P., Kuijer, J. P. A. & Barkhof, F., 1 Dec 2007, In : Human Brain Mapping. 28, 12, p. 1313-1317 5 p.

Research output: Contribution to journalArticleAcademicpeer-review

2006

ACE-it: a tool for genome-wide integration of gene dosage and RNA expression data

van Wieringen, W. N., Belien, J. A. M., Vosse, S. J., Achame, E. M. & Ylstra, B., 1 Aug 2006, In : Bioinformatics. 22, 15, p. 1919-20 2 p.

Research output: Contribution to journalArticleAcademicpeer-review

Always around, never the same: pathways of amyloid beta induced neurodegeneration throughout the pathogenic cascade of Alzheimer's disease

Hoozemans, J. J. M., Chafekar, S. M., Baas, F., Eikelenboom, P. & Scheper, W., 2006, In : Current Medicinal Chemistry. 13, 22, p. 2599-605 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Amyloid beta peptide (25-35) activates protein kinase C leading to cyclooxygenase-2 induction and prostaglandin E2 release in primary midbrain astrocytes

Hüll, M., Müksch, B., Akundi, R. S., Waschbisch, A., Hoozemans, J. J. M., Veerhuis, R. & Fiebich, B. L., Jun 2006, In : Neurochemistry International. 48, 8, p. 663-72 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Cannabinoids modulate the P-type high-voltage-activated calcium currents in purkinje neurons

Fisyunov, A., Tsintsadze, V., Min, R., Burnashev, N. & Lozovaya, N., Sep 2006, In : Journal of Neurophysiology. 96, 3, p. 1267-77 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Detecting genotype-environment interaction in monozygotic twin data: Comparing the Jinks and Fulker test and a new test based on marginal maximum likelihood estimation

Van Der Sluis, S., Dolan, C. V., Neale, M. C., Boomsma, D. I. & Posthuma, D., 1 Jun 2006, In : Twin Research and Human Genetics. 9, 3, p. 377-392 16 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Evaluation of cervical screening strategies with adjunct high-risk human papillomavirus testing for women with borderline or mild dyskaryosis

Berkhof, J., De Bruijne, M. C., Zielinski, G. D., Bulkmans, N. W. J., Rozendaal, L., Snijders, P. J. F., Verheijen, R. H. M. & Meijer, C. J. L. M., 1 Apr 2006, In : International Journal of Cancer. 118, 7, p. 1759-1768 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Genome-wide DNA copy number alterations in head and neck squamous cell carcinomas with or without oncogene-expressing human papillomavirus

Smeets, S. J., Braakhuis, B. J. M., Abbas, S., Snijders, P. J. F., Ylstra, B., Van De Wiel, M. A., Meijer, G. A., Leemans, C. R. & Brakenhoff, R. H., 20 Apr 2006, In : Oncogene. 25, 17, p. 2558-2564 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

HPV-mediated cervical carcinogenesis: concepts and clinical implications

Snijders, P. J. F., Steenbergen, R. D. M., Heideman, D. A. M. & Meijer, C. J. L. M., Jan 2006, In : Journal of Pathology. 208, 2, p. 152-64 13 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Human papillomavirus type-specific 18-month risk of high-grade cervical intraepithelial neoplasia in women with a normal or borderline/mildly dyskaryotic smear

Berkhof, J., Bulkmans, N. W. J., Bleeker, M. C. G., Bulk, S., Snijders, P. J. F., Voorhorst, F. J. & Meijer, C. J. L. M., Jul 2006, In : Cancer Epidemiology Biomarkers and Prevention. 15, 7, p. 1268-73 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Increased gene copy numbers at chromosome 20q are frequent in both squamous cell carcinomas and adenocarcinomas of the cervix

Wilting, S. M., Snijders, P. J. F., Meijer, G. A., Ylstra, B., van den Ijssel, P. R. L. A., Snijders, A. M., Albertson, D. G., Coffa, J., Schouten, J. P., van de Wiel, M. A., Meijer, C. J. L. M. & Steenbergen, R. D. M., 1 Jun 2006, In : Journal of Pathology. 209, 2, p. 220-230 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Interleukin-1 beta-induced expression of the prostaglandin E-receptor subtype EP3 in U373 astrocytoma cells depends on protein kinase C and nuclear factor-kappaB

Waschbisch, A., Fiebich, B. L., Akundi, R. S., Schmitz, M. L., Hoozemans, J. J. M., Candelario-Jalil, E., Virtainen, N., Veerhuis, R., Slawik, H., Yrjänheikki, J. & Hüll, M., Feb 2006, In : Journal of Neurochemistry. 96, 3, p. 680-93 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Intra-luminal thermometry: Is tissue type assignment a necessity for thermal analysis?

Fatehi, D., Van Der Zee, J., Wielheesen, D. H. M., Van Wieringen, W. N. & Van Rhoon, G. C., 1 Sep 2006, In : International journal of hyperthermia. 22, 6, p. 463-473 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Mechanisms and effects of loss of human leukocyte antigen class II expression in immune-privileged site-associated B-cell lymphoma

Booman, M., Douwes, J., Glas, A. M., Riemersma, S. A., Jordanova, E. S., Kok, K., Rosenwald, A., de Jong, D., Schuuring, E. & Kluin, P. M., 1 May 2006, In : Clinical Cancer Research. 12, 9, p. 2698-705 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Microvascular disease in type 1 diabetes alters brain activation: A functional magnetic resonance imaging study

Wessels, A. M., Rombouts, S. A. R. B., Simsek, S., Kuijer, J. P. A., Kostense, P. J., Barkhof, F., Scheltens, P., Snoek, F. J. & Heine, R. J., 1 Feb 2006, In : Diabetes. 55, 2, p. 334-340 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Molecular markers for cervical cancer

Steenbergen, R. D. M., Chris, C. J. L. & Snijders, P. J. F., 11 Apr 2006, Emerging Issues on HPV Infections: From Science to Practice. S. Karger AG, p. 73-81 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

Multi-group covariance and mean structure modeling of the relationship between the WAIS-III common factors and sex and educational attainment in Spain

Dolan, C. V., Colom, R., Abad, F. J., Wicherts, J. M., Hessen, D. J. & van de Sluis, S., 1 Mar 2006, In : Intelligence. 34, 2, p. 193-210 18 p.

Research output: Contribution to journalArticleAcademicpeer-review

Non-fibrillar beta-amyloid abates spike-timing-dependent synaptic potentiation at excitatory synapses in layer 2/3 of the neocortex by targeting postsynaptic AMPA receptors

Shemer, I., Holmgren, C., Min, R., Fülöp, L., Zilberter, M., Sousa, K. M., Farkas, T., Härtig, W., Penke, B., Burnashev, N., Tanila, H., Zilberter, Y. & Harkany, T., Apr 2006, In : European Journal of Neuroscience. 23, 8, p. 2035-47 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Sex differences on the Dutch WAIS-III

van der Sluis, S., Posthuma, D., Dolan, C. V., de Geus, E. J. C., Colom, R. & Boomsma, D. I., 1 May 2006, In : Intelligence. 34, 3, p. 273-289 17 p.

Research output: Contribution to journalArticleAcademicpeer-review

Stress, depression and hippocampal apoptosis

Lucassen, P. J., Heine, V. M., Muller, M. B., van der Beek, E. M., Wiegant, V. M., De Kloet, E. R., Joels, M., Fuchs, E., Swaab, D. F. & Czeh, B., Oct 2006, In : CNS and Neurological Disorders. Drug Targets. 5, 5, p. 531-46 16 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Temperature data analysis for 22 patients with advanced cervical carcinoma treated in Rotterdam using radiotherapy, hyperthermia and chemotherapy: A reference point is needed

Fatehi, D., Van der Zee, J., Van der Wal, E., Van Wieringen, W. N. & Van Rhoon, G. C., 1 Jun 2006, In : International journal of hyperthermia. 22, 4, p. 353-363 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

The significance of neuroinflammation in understanding Alzheimer's disease

Eikelenboom, P., Veerhuis, R., Scheper, W., Rozemuller, A. J. M., van Gool, W. A. & Hoozemans, J. J. M., Nov 2006, In : Journal of Neural Transmission. 113, 11, p. 1685-95 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Tiam1 takes PARt in cell polarity

Mertens, A. E. E., Pegtel, D. M. & Collard, J. G., 1 Jun 2006, In : Trends in Cell Biology. 16, 6, p. 308-316 9 p.

Research output: Contribution to journalReview articleAcademicpeer-review

X-gebonden mentale retardatie door creatine transporter defect

Translated title of the contribution: X-linked mental retardation due to creatine transporter defectDe Kort, S. W. K., De Man, S. A., Hoogeboom, A. J. M., Pouwels, P. J. W., Van Der Knaap, M. S., Mancini, G. M. S. & Salomons, G. S., 1 Oct 2006, In : Tijdschrift voor Kindergeneeskunde. 74, 5, p. 173-178 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

2005

A comparison of methods for the evaluation of binary measurement systems

van Wieringen, W. N. & van den Heuvel, E. R., 1 Oct 2005, In : Quality engineering. 17, 4, p. 495-507 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Activation of human microglia by fibrillar prion protein-related peptides is enhanced by amyloid-associated factors SAP and C1q

Veerhuis, R., Boshuizen, RS., Morbin, M., Mazzoleni, G., Hoozemans, JJM., Langedijk, JPM., Tagliavini, F., Langeveld, JPM. & Eikelenboom, P., 2005, In : Neurobiology of Disease. 19, 1-2, p. 273-282

Research output: Contribution to journalArticleAcademicpeer-review

Analysis of the efficacy and toxicity of bortezomib for treatment of relapsed or refractory multiple myeloma in community practice

Wu, K. L., Van Wieringen, W., Vellenga, E., Zweegman, S., Lokhorst, H. M. & Sonneveld, P., Jul 2005, In : Haematologica. 90, 7, p. 996-997 2 p.

Research output: Contribution to journalArticleAcademicpeer-review

A note on normal theory power calculation in SEM with data missing completely at random

Dolan, C., Van Der Sluis, S. & Grasman, R., 23 May 2005, In : Structural Equation Modeling. 12, 2, p. 245-262 18 p.

Research output: Contribution to journalArticleAcademicpeer-review