Amsterdam Neuroscience - Cellular and Molecular Mechanisms

Research Output

2019

Severe leukoencephalopathy with clinical recovery caused by recessive BOLA3 mutations

Stutterd, C. A., Lake, N. J., Peters, H., Lockhart, P. J., Taft, R. J., van der Knaap, M. S., Vanderver, A., Thorburn, D. R., Simons, C. & Leventer, R. J., 2019, JIMD Reports. Springer, Vol. 43. p. 63-70 (JIMD Reports).

Research output: Chapter in Book/Report/Conference proceedingChapterAcademicpeer-review

Short-term LPS induces aortic valve thickening in ApoE*3Leiden mice

van Broekhoven, A., Krijnen, P. A. J., Fuijkschot, W. W., Morrison, M. C., Zethof, I. P. A., van Wieringen, W. N., Smulders, Y. M., Niessen, H. W. M. & Vonk, A. B. A., 2019, In : European Journal of Clinical Investigation. 49, e13121.

Research output: Contribution to journalArticleAcademicpeer-review

Single-subject structural cortical networks in clinically isolated syndrome

Collorone, S., Prados, F., Hagens, M. H. J., Tur, C., Kanber, B., Sudre, C. H., Lukas, C., Gasperini, C., Oreja-Guevara, C., Andelova, M., Ciccarelli, O., Wattjes, M. P., Ourselin, S., Altmann, D. R., Tijms, B. M., Barkhof, F., Toosy, A. T. & MAGNIMS Study Group, 24 Jul 2019, In : Multiple Sclerosis.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Single- versus double-layer closure of the caesarean (uterine) scar in the prevention of gynaecological symptoms in relation to niche development - the 2Close study: a multicentre randomised controlled trial

Stegwee, S. I., Jordans, I. P. M., van der Voet, L. F., Bongers, M. Y., de Groot, C. J. M., Lambalk, C. B., de Leeuw, R. A., Hehenkamp, W. J. K., van de Ven, P. M., Bosmans, J. E., Pajkrt, E., Bakkum, E. A., Radder, C. M., Hemelaar, M., van Baal, W. M., Visser, H., van Laar, J. O. E. H., van Vliet, H. A. A. M., Rijnders, R. J. P., Sueters, M. & 21 others, Janssen, C. A. H., Hermes, W., Feitsma, A. H., Kapiteijn, K., Scheepers, H. C. J., Langenveld, J., de Boer, K., Coppus, S. F. P. J., Schippers, D. H., Oei, A. L. M., Kaplan, M., Papatsonis, D. N. M., de Vleeschouwer, L. H. M., van Beek, E., Bekker, M. N., Huisjes, A. J. M., Meijer, W. J., Deurloo, K. L., Boormans, E. M. A., van Eijndhoven, H. W. F. & Huirne, J. A. F., 4 Mar 2019, In : BMC Pregnancy and Childbirth. 19, 1, p. 85 85.

Research output: Contribution to journalArticleAcademicpeer-review

Slowly expanding/evolving lesions as a magnetic resonance imaging marker of chronic active multiple sclerosis lesions

Elliott, C., Wolinsky, J. S., Hauser, S. L., Kappos, L., Barkhof, F., Bernasconi, C., Wei, W., Belachew, S. & Arnold, D. L., 1 Dec 2019, In : Multiple Sclerosis. 25, 14, p. 1915-1925

Research output: Contribution to journalArticleAcademicpeer-review

Spatial patterns of white matter hyperintensities associated with Alzheimer's disease risk factors in a cognitively healthy middle-aged cohort

Salvadó, G., Brugulat-Serrat, A., Sudre, C. H., Grau-Rivera, O., Suárez-Calvet, M., Falcon, C., Fauria, K., Cardoso, M. J., Barkhof, F., Molinuevo, J. L., Gispert, J-D. & ALFA Study, 24 Jan 2019, In : Alzheimer's Research & Therapy. 11, 1, 12.

Research output: Contribution to journalArticleAcademicpeer-review

Spectroscopic detection of brain propylene glycol in neonates: Effects of different pharmaceutical formulations of phenobarbital

Pouwels, P. J. W., van de Lagemaat, M., van de Pol, L. A., Witjes, B. C. M. & Zonnenberg, I. A., 2019, In : Journal of magnetic resonance imaging : JMRI. 49, 4, p. 1062-1068

Research output: Contribution to journalArticleAcademicpeer-review

Standardized Assessment of Automatic Segmentation of White Matter Hyperintensities and Results of the WMH Segmentation Challenge

Kuijf, H. J., Biesbroek, J. M., de Bresser, J., Heinen, R., Andermatt, S., Bento, M., Berseth, M., Belyaev, M., Cardoso, M. J., Casamitjana, A., Collins, D. L., Dadar, M., Georgiou, A., Ghafoorian, M., Jin, D., Khademi, A., Knight, J., Li, H., Llado, X., Luna, M. & 24 others, Mahmood, Q., McKinley, R., Mehrtash, A., Ourselin, S., Park, B-Y., Park, H., Park, S. H., Pezold, S., Puybareau, E., Rittner, L., Sudre, C. H., Valverde, S., Vilaplana, V., Wiest, R., Xu, Y., Xu, Z., Zeng, G., Zhang, J., Zheng, G., Chen, C., van der Flier, W., Barkhof, F., Viergever, M. A. & Biessels, G. J., 1 Nov 2019, In : IEEE Transactions on Medical Imaging. 38, 11, p. 2556-2568 13 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Supplemental data for Blood platelets contain tumor-derived RNA biomarkers

Nilsson, R. J. A., Balaj, L., Hulleman, E., Van Rijn, S., Pegtel, D. M., Walraven, M., Widmark, A., Gerritsen, W. R., Verheul, H. M., Vandertop, W. P., Noske, D. P., Skog, J. & Wurdinger, T., 2019, In : Journal of Applied Physics. 5, Xxx, p. 17-20 4 p.

Research output: Contribution to journalArticleAcademicpeer-review

Surfing the Hippocampus Wave

Bartel, F., 2019, 202 p.

Research output: ThesisResearch VU University Amsterdam, graduation VU University Amsterdam

Open Access

SVM recursive feature elimination analyses of structural brain MRI predicts near-term relapses in patients with clinically isolated syndromes suggestive of multiple sclerosis

Wottschel, V., Chard, D. T., Enzinger, C., Filippi, M., Frederiksen, J. L., Gasperini, C., Giorgio, A., Rocca, M. A., Rovira, A., de Stefano, N., Tintoré, M., Alexander, D. C., Barkhof, F., Ciccarelli, O. & MAGNIMS study group and the EuroPOND consortium, 2019, In : NeuroImage: Clinical. 24, 102011.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Synaptotagmin-1 enables frequency coding by suppressing asynchronous release in a temperature dependent manner

Huson, V., van Boven, M. A., Stuefer, A., Verhage, M. & Cornelisse, L. N., 1 Dec 2019, In : Scientific Reports. 9, 1, p. 11341

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Synchronizing neurotransmission: How different factors act together on the energy barrier for synaptic vesicle fusion

Huson, V. W. J., 2019, 242 p.

Research output: ThesisResearch VU University Amsterdam, graduation VU University Amsterdam

Open Access

SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse

Koopmans, F., van Nierop, P., Andres-Alonso, M., Byrnes, A., Cijsouw, T., Coba, M. P., Cornelisse, L. N., Farrell, R. J., Goldschmidt, H. L., Howrigan, D. P., Hussain, N. K., Imig, C., de Jong, A. P. H., Jung, H., Kohansalnodehi, M., Kramarz, B., Lipstein, N., Lovering, R. C., MacGillavry, H., Mariano, V. & 53 others, Mi, H., Ninov, M., Osumi-Sutherland, D., Pielot, R., Smalla, K-H., Tang, H., Tashman, K., Toonen, R. F. G., Verpelli, C., Reig-Viader, R., Watanabe, K., van Weering, J., Achsel, T., Ashrafi, G., Asi, N., Brown, T. C., de Camilli, P., Feuermann, M., Foulger, R. E., Gaudet, P., Joglekar, A., Kanellopoulos, A., Malenka, R., Nicoll, R. A., Pulido, C., de Juan-Sanz, J., Sheng, M., Südhof, T. C., Tilgner, H. U., Bagni, C., Bayés, À., Biederer, T., Brose, N., Chua, J. J. E., Dieterich, D. C., Gundelfinger, E. D., Hoogenraad, C., Huganir, R. L., Jahn, R., Kaeser, P. S., Kim, E., Kreutz, M. R., McPherson, P. S., Neale, B. M., O'Connor, V., Posthuma, D., Ryan, T. A., Sala, C., Feng, G., Hyman, S. E., Thomas, P. D., Smit, A. B. & Verhage, M., 17 Jul 2019, In : Neuron. 103, 2, p. 217-234.e4

Research output: Contribution to journalArticleAcademicpeer-review

TADPOLE challenge: Accurate alzheimer’s disease prediction through crowdsourced forecasting of future data

Marinescu, R. Z. V., Oxtoby, N. P., Young, A. L., Bron, E. E., Toga, A. W., Weiner, M. W., Barkhof, F., Fox, N. C., Golland, P., Klein, S. & Alexander, D. C., 2019, Predictive Intelligence in Medicine - 2nd International Workshop, PRIME 2019, Held in Conjunction with MICCAI 2019, Proceedings. Rekik, I., Adeli, E. & Park, S. H. (eds.). Springer, Vol. 11843 LNCS. p. 1-10 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

Research output: Chapter in Book/Report/Conference proceedingConference contributionAcademicpeer-review

Temporal ordering of multimodal biomarker abnormality in multiple sclerosis

Dekker, I., Schoonheim, M. M., Venkatraghavan, V., Eijlers, A. J. C., Brouwer, I., Wattjes, M. P., Wink, A. M., Geurts, J. J. G., Uitdehaag, B. M. J., Oxtoby, N. P., Vrenken, H., Killestein, J., Barkhof, F. & Wottschel, V., Sep 2019, In : Multiple Sclerosis Journal. 25, p. 461-462

Research output: Contribution to journalMeeting AbstractAcademic

Thalamus atrophy progresses faster in subjects with early MS who have more damage in the connected white matter and who show increasing disability over time

Weeda, M. M., Pruis, I. J., Brouwer, I., Bellenberg, B., Schneider, R., Lukas, C., Barkhof, F., Vrenken, H. & Pouwels, P. J. W., Sep 2019, In : Multiple Sclerosis Journal. 25, p. 689-690

Research output: Contribution to journalMeeting AbstractAcademic

The Clinical Phenotype of Vascular Cognitive Impairment in Patients with Type 2 Diabetes Mellitus

Groeneveld, O. N., Moneti, C., Heinen, R., de Bresser, J., Kuijf, H. J., Exalto, L. G., Boomsma, J. M. F., Kappelle, L. J., Barkhof, F., Prins, N. D., Scheltens, P., van der Flier, W. M. & Biessels, G. J., 1 Jan 2019, In : Journal of Alzheimer's Disease. 68, 1, p. 311-322 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The Dutch Breast Implant Registry: Registration of Breast Implant-Associated Anaplastic Large Cell Lymphoma-A Proof of Concept

Becherer, B. E., de Boer, M., Spronk, P. E. R., Bruggink, A. H., de Boer, J. P., van Leeuwen, F. E., Mureau, M. A. M., van der Hulst, R. R. J. W., de Jong, D. & Rakhorst, H. A., 1 May 2019, In : Plastic and reconstructive surgery. 143, 5, p. 1298-1306 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The Effect of Intrathecal Baclofen in Dyskinetic Cerebral Palsy: The IDYS Trial

Bonouvrié, LA., Becher, JG., Vles, J. S. H., Vermeulen, R. J. & Buizer, AI., 1 Jul 2019, In : Annals of Neurology. 86, 1, p. 79-90 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The effect of leucovorin rescue therapy on methotrexate-induced oral mucositis in the treatment of paediatric ALL: A systematic review

van der Beek, J. N., Oosterom, N., Pieters, R., de Jonge, R., van den Heuvel-Eibrink, M. M. & Heil, S. G., 2019, In : Critical Reviews in Oncology/Hematology. 142, p. 1-8

Research output: Contribution to journalReview articleAcademicpeer-review

The Generalized Ridge Estimator of the Inverse Covariance Matrix

van Wieringen, W. N., 2 Oct 2019, In : Journal of Computational and Graphical Statistics. 28

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The genotypic spectrum of ALDH7A1 mutations resulting in pyridoxine dependent epilepsy: A common epileptic encephalopathy

Coughlin, C. R., Swanson, M. A., Spector, E., Meeks, N. J. L., Kronquist, K. E., Aslamy, M., Wempe, M. F., van Karnebeek, C. D. M., Gospe, S. M., Aziz, V. G., Tsai, B. P., Gao, H., Nagy, P. L., Hyland, K., van Dooren, S. J. M., Salomons, G. S. & van Hove, J. L. K., Mar 2019, In : Journal of Inherited Metabolic Disease. 42, 2, p. 353-361

Research output: Contribution to journalArticleAcademicpeer-review

The Impact Of Reference Region Choice On The Apparent Ordering Of Amyloid Deposition

Heeman, F., Yaqub, M., Collij, L., Ingala, S., Salvado, G., Wink, A., Visser, P., van Berckel, B. N. M., Gispert Lopez, J. D., Barkhof, F., Lammertsma, A. A. & Alves, I. L., Oct 2019, In : European Journal of Nuclear Medicine and Molecular Imaging. 46, SUPPL 1, p. S787-S788

Research output: Contribution to journalMeeting AbstractAcademic

The Meta VCI Map consortium for meta-analyses on strategic lesion locations for vascular cognitive impairment using lesion-symptom mapping: Design and multicenter pilot study

Weaver, N. A., Zhao, L., Biesbroek, J. M., Kuijf, H. J., Aben, H. P., Bae, H-J., Caballero, M. Á. A., Chappell, F. M., Chen, C. P. L. H., Dichgans, M., Duering, M., Georgakis, M. K., van der Giessen, R. S., Gyanwali, B., Hamilton, O. K. L., Hilal, S., vom Hofe, E. M., de Kort, P. L. M., Koudstaal, P. J., Lam, B. Y. K. & 31 others, Lim, J-S., Makin, S. D. J., Mok, V. C. T., Shi, L., Valdés Hernández, M. C., Venketasubramanian, N., Wardlaw, J. M., Wollenweber, F. A., Wong, A., Xin, X., DeCarli, C., Fletcher, E. A., Maillard, P., Barnes, J., Sudre, C. H., Schott, J. M., Ikram, M. A., Papma, J. M., Steketee, R. M. E., Vernooij, M. W., Bordet, R., Lopes, R., Huang, C. W., Chaturvedi, N., Barkhof, F., van der Flier, W. M., Meta VCI Map consortium, Calgary Normative Study group, Framingham Heart Study group, The Dutch Parelsnoer Institute – Neurodegenerative diseases group & TABASCO group, 1 Dec 2019, In : Alzheimer's and Dementia: Diagnosis, Assessment and Disease Monitoring. 11, p. 310-326

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The Mr Human Reproduction experience

Lambalk, C. B., 1 Jan 2019, In : Human Reproduction. 34, 1, p. 1-2

Research output: Contribution to journalEditorialAcademicpeer-review

Open Access

The quantitative neuroradiology initiative framework: Application to dementia

Goodkin, O., Pemberton, H., Vos, S. B., Prados, F., Sudre, C. H., Moggridge, J., Cardoso, M. J., Ourselin, S., Bisdas, S., White, M., Yousry, T., Thornton, J. & Barkhof, F., 1 Jan 2019, In : British Journal of Radiology. 92, 1101, 20190365.

Research output: Contribution to journalReview articleAcademicpeer-review

The RAB3-RIM Pathway Is Essential for the Release of Neuromodulators

Persoon, C. M., Hoogstraaten, R. I., Nassal, J. P., van Weering, J. R. T., Kaeser, P. S., Toonen, R. F. & Verhage, M., 18 Dec 2019, In : Neuron. 104, 6, p. 1065-1080.e12

Research output: Contribution to journalArticleAcademicpeer-review

Therapeutic drug monitoring of methotrexate in disease

de Jonge, R., Muller, IB., Gosselt, HRG. & Jansen, G., 2019, In : Research Outreach. 110, p. 161-164 4 p.

Research output: Contribution to journalArticlePopular

Open Access
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The relationship between FSH receptor polymorphism status and IVF cycle outcome: a retrospective observational study

König, T. E., van der Lee, J., Schats, R. & Lambalk, C. B., 1 Aug 2019, In : Reproductive BioMedicine Online. 39, 2, p. 231-240

Research output: Contribution to journalArticleAcademicpeer-review

The role of MRI in pharmacovigilance of natalizumab-treated MS patients: a “known unknown”?

Wattjes, MP., 2019, 244 p.

Research output: ThesisResearch VU University Amsterdam, graduation VU University Amsterdam

Open Access

The spectral condition number plot for regularization parameter evaluation

Peeters, C. F. W., van de Wiel, M. A. & van Wieringen, W. N., 12 Jul 2019, In : Computational Statistics.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The use of molecular markers for cervical screening of women living with HIV in South Africa

Kremer, W. W., van Zummeren, M., Breytenbach, E., Richter, K. L., Steenbergen, R. D. M., Meijer, C. J. L. M. & Dreyer, G., 1 Nov 2019, In : AIDS. 33, 13, p. 2035-2042 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The vaginal microbiome as a predictor for outcome of in vitro fertilization with or without intracytoplasmic sperm injection: a prospective study

Koedooder, R., Singer, M., Schoenmakers, S., Savelkoul, P. H. M., Morré, S. A., de Jonge, J. D., Poort, L., Cuypers, W. J. S. S., Beckers, N. G. M., Broekmans, F. J. M., Cohlen, B. J., den Hartog, J. E., Fleischer, K., Lambalk, C. B., Smeenk, J. M. J. S., Budding, A. E. & Laven, J. S. E., 1 Jan 2019, In : Human Reproduction. 34, 6, p. 1042-1054 13 p., dez065.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Thyroid function in neonates conceived after hysterosalpingography with iodinated contrast media

Van Welie, N., Portela, M., Roest, I., van Rijswijk, J., Verhoeve, H., Hoek, A., Bourdrez, P., de Bruin, J. P., Nap, A., Goddijn, M., Hooker, A., van Heteren, C., Koks, C., Lambalk, C., Dreyer, K., Mol, B. W., Finken, M. & Mijatovic, V., Sep 2019, In : Hormone Research in Paediatrics. 91, p. 351-351

Research output: Contribution to journalMeeting AbstractAcademic

Transcription Factor 2I Regulates Neuronal Development via TRPC3 in 7q11.23 Disorder Models

Deurloo, M. H. S., Turlova, E., Chen, W-L., Lin, Y. W., Tam, E., Tassew, N. G., Wu, M., Huang, Y-C., Crawley, J. N., Monnier, P. P., Groffen, A. J. A., Sun, H-S., Osborne, L. R. & Feng, Z-P., 1 May 2019, In : Molecular Neurobiology. 56, 5, p. 3313-3325

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Treatment effect of oil-based contrast is related to experienced pain at HSG: a post-hoc analysis of the randomised H2Oil study

van Welie, N., Dreyer, K., van Rijswijk, J., Verhoeve, H. R., Goddijn, M., Nap, A. W., Smeenk, J. M. J., Traas, M. A. F., Rijnsaardt-Lukassen, H. G. M., van Dongen, A. J. C. M., Bourdrez, P., de Bruin, J. P., Sluijmer, A. V., Gijsen, A. P., van de Ven, P. M., Lambalk, C. B., Mijatovic, V. & Mol, B. W. J., 1 Dec 2019, In : Human Reproduction. 34, 12, p. 2391-2398 8 p.

Research output: Contribution to journalArticleAcademicpeer-review

Tubal flushing with oil- or water-based contrast medium: can we identify markers that indicate treatment benefit?

van Rijswijk, J., van Welie, N., Dreyer, K., Tajik, P., Lambalk, C. B., Hompes, P., Mijatovic, V., Mol, B. W. J. & Zafarmand, M. H., 1 Mar 2019, In : Human reproduction open. 2019, 3

Research output: Contribution to journalArticleAcademicpeer-review

Unconventional secretion factor GRASP55 is increased by pharmacological unfolded protein response inducers in neurons

van Ziel, A. M., Largo-Barrientos, P., Wolzak, K., Verhage, M. & Scheper, W., 2019, In : Scientific Reports. 9, 1, 1567.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Unraveling treatment response in multiple sclerosis: A clinical and MRI challenge

Gasperini, C., Prosperini, L., Tintoré, M., Sormani, M. P., Filippi, M., Rio, J., Palace, J., Rocca, M. A., Ciccarelli, O., Barkhof, F., Sastre-Garriga, J., Vrenken, H., Frederiksen, J. L., Yousry, T. A., Enzinger, C., Rovira, A., Kappos, L., Pozzilli, C., Montalban, X. & de Stefano, N., 22 Jan 2019, In : Neurology. 92, 4, p. 180-192 13 p.

Research output: Contribution to journalReview articleAcademicpeer-review

Open Access

Uterine function, pregnancy complications, and pregnancy outcomes among female childhood cancer survivors

van de Loo, L. E. X. M., van den Berg, M. H., Overbeek, A., van Dijk, M., Damen, L., Lambalk, C. B., Ronckers, C. C. M., van den Heuvel-Eibrink, M. M., Kremer, L. C. M., van der Pal, H. J., Laven, J. S. E., Tissing, W. J. E., Loonen, J. J., Versluys, B., Bresters, D., Kaspers, G. J. L., van Leeuwen, F. E., van Dulmen-den Broeder, E. & DCOG LATER-VEVO Study Group, 1 Feb 2019, In : Fertility and Sterility. 111, 2, p. 372-380

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Open Access

Vanishing white matter: deregulated integrated stress response as therapy target

Abbink, T. E. M., Wisse, L. E., Jaku, E., Thiecke, M. J., Voltolini-González, D., Fritsen, H., Bobeldijk, S., ter Braak, T. J., Polder, E., Postma, N. L., Bugiani, M., Struijs, E. A., Verheijen, M., Straat, N., van der Sluis, S., Thomas, A. A. M., Molenaar, D. & van der Knaap, M. S., 1 Jan 2019, In : Annals of Clinical and Translational Neurology. 6, 8, p. 1407-1422 16 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Variable Interpretation of the Dystonia Consensus Classification Items Compromises Its Solidity

van Egmond, M. E., Contarino, M. F., Lugtenberg, C. H. A., Peall, K. J., Brouwer, O. F., Fung, V. S. C., Roze, E., Stewart, R. E., Willemsen, M. A., Wolf, N. I., de Koning, T. J. & Tijssen, M. A., 1 Mar 2019, In : Movement Disorders. 34, 3, p. 317-320

Research output: Contribution to journalArticleAcademicpeer-review