Medical Microbiology and Infection Control

Research Output 1992 2019

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2019

Amplified fragment length polymorphism and whole genome sequencing: A comparison of methods in the investigation of a nosocomial outbreak with vancomycin resistant enterococci

Janes, V. A., Notermans, D. W., Spijkerman, I. J. B., Visser, C. E., Jakobs, M. E., van Houdt, R., Willems, R. J. L., de Jong, M. D., Schultsz, C. & Matamoros, S. B., 23 Sep 2019, In : Antimicrobial Resistance and Infection Control. 8, 1, 153.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Antibody testing in estimating past exposure to chlamydia trachomatis in the Netherlands chlamydia cohort study

Hoenderboom, B. M., van Willige, M. E., Land, J. A., Pleijster, J., Götz, H. M., van Bergen, J. E. A. M., Dukers-Muijrers, N. H. T. M., Hoebe, C. J. P. A., van Benthem, B. H. B. & Morré, S. A., 1 Oct 2019, In : Microorganisms. 7, 10, 442.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Artificial intelligence: Power for civilisation - And for better healthcare

Horgan, D., Romao, M., Morré, S. A. & Kalra, D., 2019, In : Public Health Genomics.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Bacterial inclusion bodies function as vehicles for dendritic cell-mediated T cell responses

Schetters, S. T. T., Jong, W. S. P., Kruijssen, L. J. W., Saparoea, H. B. V. D. B. V., Engels, S., Unger, W. W. J., Houben, D., den Haan, J. M. M., Luirink, J. & Kooyk, Y. V., 8 Oct 2019, In : Cellular Immunology.

Research output: Contribution to journalArticleAcademicpeer-review

Borrelia miyamotoi infection leads to cross-reactive antibodies to the C6 peptide in mice and men

Koetsveld, J., Platonov, A. E., Kuleshov, K., Wagemakers, A., Hoornstra, D., Ang, W., Szekeres, S., van Duijvendijk, G. L. A., Fikrig, E., Embers, M. E., Sprong, H. & Hovius, J. W., 1 Jan 2019, In : Clinical Microbiological and Infection.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Cell Type- and Exposure-Specific Modulation of CD63/CD81-Positive and Tissue Factor-Positive Extracellular Vesicle Release in response to Respiratory Toxicants

Stassen, F. R. M., van Eijck, P. H., Savelkoul, P. H. M., Wouters, E. F. M., Rohde, G. G. U., Briedé, J. J., Reynaert, N. L., de Kok, T. M. & Benedikter, B. J., 2019, In : Oxidative medicine and cellular longevity. 2019, p. 5204218

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Chlamydia trachomatis whole-proteome microarray analysis of the netherlands chlamydia cohort study

Hufnagel, K., Hoenderboom, B., Harmel, C., Rohland, J. K., van Benthem, B. H. B., Morré, S. A. & Waterboer, T., 2019, In : Microorganisms. 7, 12, 703.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Combining individual Chlamydia trachomatis IgG antibodies MOMP, TARP, CPAF, OMP2, and HSP60 for tubal factor infertility prediction

van Ess, E. F., Eck-Hauer, A., Land, J. A., Morré, S. A. & Ouburg, S., 2019, In : American Journal of Reproductive Immunology. e13091.

Research output: Contribution to journalArticleAcademicpeer-review

Contact precautions in single-bed or multiple-bed rooms for patients with extended-spectrum β-lactamase-producing Enterobacteriaceae in Dutch hospitals: a cluster-randomised, crossover, non-inferiority study

Kluytmans-van den Bergh, M. F. Q., Bruijning-Verhagen, P. C. J., Vandenbroucke-Grauls, C. M. J. E., de Brauwer, E. I. G. B., Buiting, A. G. M., Diederen, B. M., van Elzakker, E. P. M., Friedrich, A. W., SoM Study Group, Hopman, J., al Naiemi, N., Rossen, J. W. A., Ruijs, G. J. H. M., Savelkoul, P. H. M., Verhulst, C., Vos, M. C., Voss, A., Bonten, M. J. M. & Kluytmans, J. A. J. W., 1 Oct 2019, In : The Lancet Infectious Diseases. 19, 10, p. 1069-1079

Research output: Contribution to journalArticleAcademicpeer-review

Cooperating on Data: The Missing Element in Bringing Real Innovation to Europe's Healthcare Systems

Horgan, D., Bernini, C., Thomas, P. P. M. & Morre, S. A., 1 Dec 2019, In : Public Health Genomics. 22, 3-4, p. 77-101 25 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance

Merat, S. J., Bru, C., van de Berg, D., Molenkamp, R., Tarr, A. W., Koekkoek, S., Kootstra, N. A., Prins, M., Ball, J. K., Bakker, A. Q., de Jong, M. D., Spits, H., Beaumont, T. & Schinkel, J., 1 Jul 2019, In : Journal of Hepatology. 71, 1, p. 14-24

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

CSN5 inhibition triggers inflammatory signaling and Rho/ROCK-dependent loss of endothelial integrity

Majolée, J., Pronk, M. C. A., Jim, K. K., van Bezu, J. S. M., van der Sar, A. M., Hordijk, P. L. & Kovačević, I., 1 Dec 2019, In : Scientific Reports. 9, 1, 8131.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Disclosure of human immunodeficiency virus status to children in South Africa: A comprehensive analysis

van Elsland, S. L., Peters, R. P. H., Grobbelaar, C., Ketelo, P., Kok, M. O., Cotton, M. F. & van Furth, A. M., 22 Aug 2019, In : SOUTHERN AFRICAN JOURNAL OF HIV MEDICINE. 20, 1

Research output: Contribution to journalArticleAcademicpeer-review

Effects of an over-the-counter lactic-acid containing intra-vaginal douching product on the vaginal microbiota

van der Veer, C., Bruisten, S. M., van Houdt, R., Matser, A. A., Tachedjian, G., van de Wijgert, J. H. H. M., de Vries, H. J. C. & van der Helm, J. J., 2019, In : BMC Microbiology. 19, 1, 168.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Evaluatie van een nieuwe Nederlandse vancomycine- doseerrichtlijn en populatiefarmacokinetiek van vancomycine bij preterme en a terme neonaten

Koedood, L., de Haan, T. R., Hodiamont, C. J., van Haelst, I. M. M. & Mathot, R. A. A., 12 Apr 2019, In : Pharmaceutisch Weekblad. 154, 15, p. 19-23 5 p.

Research output: Contribution to journalArticleProfessional

Evaluation of blood culture epidemiology and efficiency in a large European teaching hospital

Nannan Panday, R. S., Wang, S., van de Ven, P. M., Hekker, T. A. M., Alam, N. & Nanayakkara, P. W. B., 2019, In : PLoS ONE. 14, 3, e0214052.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Faecal Microbiota Dynamics and their Relation to Disease Course in Crohn's Disease

Galazzo, G., Tedjo, D. I., Wintjens, D. S. J., Savelkoul, P. H. M., Masclee, A. A. M., Bodelier, A. G. L., Pierik, M. J., Jonkers, D. M. A. E. & Penders, J., 27 Sep 2019, In : Journal of Crohn's & colitis. 13, 10, p. 1273-1282

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

High prevalence of multidrug resistant Enterobacteriaceae among residents of long term care facilities in Amsterdam, the Netherlands

van Dulm, E., Tholen, A. T. R., Pettersson, A., van Rooijen, M. S., Willemsen, I., Molenaar, P., Damen, M., Gruteke, P., Oostvogel, P., Kuijper, E. J., Hertogh, C. M. P. M., Vandenbroucke-Grauls, C. M. J. E. & Scholing, M., 1 Jan 2019, In : PLoS ONE. 14, 9, e0222200.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

High Rate of Repeat Sexually Transmitted Diseases Among Men Who Have Sex With Men in South Africa: A Prospective Cohort Study

van Liere, G. A. F. S., Kock, M. M., Radebe, O., Struthers, H. E., Morre, S., McIntyre, J. A. & Peters, R. P. H., 2019, In : Sexually Transmitted Diseases. 46, 11, p. e105-e107

Research output: Contribution to journalArticleAcademicpeer-review

High-resolution evolutionary analysis of within-host hepatitis C virus infection

Raghwani, J., Wu, C-H., Ho, C. K. Y., de Jong, M., Molenkamp, R., Schinkel, J., Pybus, O. G. & Lythgoe, K. A., 1 Jun 2019, In : Journal of Infectious Diseases. 219, 11, p. 1722-1729

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

HIV-1 exposure and immune activation enhance sexual transmission of Hepatitis C virus by primary Langerhans cells

Nijmeijer, B. M., Sarrami-Forooshani, R., Steba, G. S., Schreurs, R. R. CE., Koekkoek, S. M., Molenkamp, R., Schinkel, J., Reiss, P., Siegenbeek van Heukelom, M. L., van der Valk, M., Ribeiro, C. M. S. & Geijtenbeek, T. B. H., 1 Mar 2019, In : Journal of the international aids society. 22, 3, e25268.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Integrated transcriptomic and proteomic analysis of pathogenic mycobacteria and their esx-1 mutants reveal secretion-dependent regulation of ESX-1 substrates and WhiB6 as a transcriptional regulator

Abdallah, A. M., Weerdenburg, E. M., Guan, Q., Ummels, R., Borggreve, S., Adroub, S. A., Malas, T. B., Naeem, R., Zhang, H., Otto, T. D., Bitter, W. & Pain, A., 1 Jan 2019, In : PLoS ONE. 14, 1, e0211003.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Microbiota of Children With Complex Appendicitis: Different Composition and Diversity of The Microbiota in Children With Complex Compared With Simple Appendicitis

The, S-M. M. L., Bakx, R., Budding, A. E., de Meij, T. G. J., van der Lee, J. H., Bunders, M. J., Poort, L., Heij, H. A., van Heurn, L. W. E. & Gorter, R. R., 1 Oct 2019, In : Pediatric Infectious Disease Journal. 38, 10, p. 1054-1060

Research output: Contribution to journalArticleAcademicpeer-review

Moderate positive predictive value of a multiplex real-time PCR on whole blood for pathogen detection in critically ill patients with sepsis

van de Groep, K., Bos, M. P., Varkila, M. R. J., Savelkoul, P. H. M., Ong, D. S. Y., Derde, L. P. G., Juffermans, N. P., van der Poll, T., Bonten, M. J. M., Cremer, O. L. & on behalf of the MARS consortium, 1 Oct 2019, In : European Journal of Clinical Microbiology and Infectious Diseases. 38

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Optimization of secretion and surface localization of heterologous OVA protein in mycobacteria by using LipY as a carrier

Burggraaf, M. J., Ates, L. S., Speer, A., van der Kuij, K., Kuijl, C. & Bitter, W., 6 Mar 2019, In : Microbial Cell Factories. 18, 1, 44.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Paediatric ART Adherence in South Africa: A Comprehensive Analysis

van Elsland, S. L., Peters, R. P. H., Grobbelaar, N., Ketelo, P., Kok, M. O., Cotton, M. F. & van Furth, A. M., 15 Feb 2019, In : AIDS and Behavior. 23, 2, p. 475-488

Research output: Contribution to journalArticleAcademicpeer-review

PCR Characterization of Microbiota on Contracted and Non-Contracted Breast Capsules

Bachour, Y., Poort, L., Verweij, S. P., van Selms, G., Winters, H. A. H., Ritt, M. J. P. F., Niessen, F. B. & Budding, A. E., 15 Aug 2019, In : Aesthetic Plastic Surgery. 43, 4, p. 918-926 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Predictive Performance of Cardiovascular Disease Risk Prediction Algorithms in People Living With HIV

Van Zoest, R. A., Law, M., Sabin, C. A., Vaartjes, I., Van Der Valk, M., Arends, J. E., Reiss, P., Wit, F. W. & on behalf of the ATHENA National Observational HIV Cohort, 15 Aug 2019, In : Journal of Acquired Immune Deficiency Syndromes. 81, 5, p. 562-571 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Predictive values of serum chlamydia trachomatis troa and htra igg antibodies as markers of persistent infection in the detection of pelvic adhesions and tubal occlusion

Rantsi, T., Land, J. A., Joki-Korpela, P. I., Ouburg, S., Hokynar, K., Paavonen, J., Tiitinen, A. & Puolakkainen, M., 2019, In : Microorganisms. 7, 10, 391.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Prevalence of plasmid-mediated AmpC in Enterobacteriaceae isolated from humans and from retail meat in Zagazig, Egypt

Rensing, K. L., Abdallah, H. M., Koek, A., Elmowalid, G. A., Vandenbroucke-Grauls, C. M. J. E., Al Naiemi, N. & van Dijk, K., 26 Feb 2019, In : Antimicrobial Resistance and Infection Control. 8, 1, 45.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Protease domain and transmembrane domain of the type VII secretion mycosin protease determine system-specific functioning in mycobacteria

van Winden, V. J. C., Damen, M. P. M., Ummels, R., Bitter, W. & Houben, E. N. G., 2019, In : Journal of Biological Chemistry. 294, 13, p. 4806-4814

Research output: Contribution to journalArticleAcademicpeer-review

Protein export into and across the atypical diderm cell envelope of mycobacteria

van Winden, V. J. C., Houben, E. N. G. & Braunstein, M., 1 Jan 2019, In : Microbiology spectrum. 7, 4, GPP3-0043-2018.

Research output: Contribution to journalArticleAcademicpeer-review

Proteomic analysis reveals procoagulant properties of cigarette smoke-induced extracellular vesicles

Benedikter, B. J., Bouwman, F. G., Heinzmann, A. C. A., Vajen, T., Mariman, E. C., Wouters, E. F. M., Savelkoul, P. H. M., Koenen, R. R., Rohde, G. G. U., van Oerle, R., Spronk, H. M. & Stassen, F. R. M., 1 Jan 2019, In : Journal of Extracellular Vesicles. 8, 1, 1585163.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Provision of Sexually Transmitted Infection Services in a Mobile Clinic Reveals High Unmet Need in Remote Areas of South Africa: A Cross-sectional Study

Hoffman, C. M., Mbambazela, N., Sithole, P., Morré, S. A., Dubbink, J. H., Railton, J., McIntyre, J. A., Kock, M. M. & Peters, R. P. H., 1 Mar 2019, In : Sexually Transmitted Diseases. 46, 3, p. 206-212 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Randomized clinical trial of selective decontamination of the digestive tract in elective colorectal cancer surgery (SELECT trial)

Abis, G. S. A., Stockmann, H. B. A. C., Bonjer, H. J., van Veenendaal, N., van Doorn-Schepens, M. L. M., Budding, A. E., Wilschut, J. A., van Egmond, M., Oosterling, S. J., Abis, G. S. A., Bonjer, H. J., van Veenendaal, N., van Doorn-Schepens, M. L. M., Budding, A. E., de Lange, E. S. M., Tuynman, J. B., e. Vandenbroucke-Grauls, C. M. J., Wilschut, J. A., van Egmond, M., C. Stockmann, H. B. A. & 22 othersvan der Bij, G. J., de Korte, N., Oosterling, S. J., Acherman, Y. I. Z., den Boer, F. C., Sonneveld, D. J. A., Poort, L., Abis, G. S. A., Bonjer, H. J., van Veenendaal, N., van Doorn-Schepens, M. L. M., Budding, A. E., de Lange, E. S. M., Tuynman, J. B., e Vandenbroucke-Grauls, C. M. J., Wilschut, J. A., van Egmond, M., C Stockmann, H. B. A., van der Bij, G. J., de Korte, N., Oosterling, S. J. & the SELECT trial study group, 1 Mar 2019, In : British Journal of Surgery. 106, 4, p. 355-363 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Recommendations for the clinical interpretation and reporting of copy number gains using gene panel NGS analysis in routine diagnostics

Eijkelenboom, A., Tops, B. B. J., van den Berg, A., van den Brule, A. J. C., Dinjens, W. N. M., Dubbink, H. J., Ter Elst, A., Geurts-Giele, W. R. R., Groenen, P. J. T. A., Groenendijk, F. H., Heideman, D. A. M., Huibers, M. M. H., Huijsmans, C. J. J., Jeuken, J. W. M., van Kempen, L. C., Korpershoek, E., Kroeze, L. I., de Leng, W. W. J., van Noesel, C. J. M., Speel, E-J. M. & 5 othersVogel, M. J., van Wezel, T., Nederlof, P. M., Schuuring, E. & Ligtenberg, M. J. L., 1 Jan 2019, In : Virchows Archiv.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Risk of acquisition of human diarrhoeagenic Escherichia coli virulence genes in intercontinental travellers: A prospective, multi-centre study

van Hattem, J. M., Cabal, A., Arcilla, M. S., Alvarez, J., de Jong, M. D., Melles, D. C., Penders, J., Bootsma, M. C. J., van Genderen, P. J., Goorhuis, A., Grobusch, M., Molhoek, N., Oude Lashof, A. M. L., Stobberingh, E. E., Verbrugh, H. A., Schmidt, C. G., Schultsz, C. & COMBAT Consortium, 1 Sep 2019, In : Travel Medicine and Infectious Disease. 31

Research output: Contribution to journalArticleAcademicpeer-review

Role of Toll-Like Receptor 5 (TLR5) in Experimental Melioidosis

Birnie, E., Weehuizen, T. A. F., Lankelma, J. M., de Jong, H. K., Koh, G. C. K. W., van Lieshout, M. H. P., Roelofs, J. J. T. H., Budding, A. E., de Vos, A. F., van der Poll, T. & Wiersinga, W. J., 1 Jan 2019, In : Infection and Immunity. 87, 8, e00409.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Sensitivity of point-of-care testing C reactive protein and procalcitonin to diagnose urinary tract infections in Dutch nursing homes: PROGRESS study protocol

Kuil, S. D., Hidad, S., Fischer, J. C., Harting, J., Hertogh, C. M. P. M., Prins, J. M., van Leth, F., de Jong, M. D. & Schneeberger, C., 1 Aug 2019, In : BMJ Open. 9, 8, e031269.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Serial Microbiota Analysis after Fecal Microbiota Transplantation in a Child with Down's Syndrome

Beurden, Y. H. V., Meijer, L., Vermont, C. L., Budding, A. E., Mulder, C. J. J. & Meij, T. G. D., 1 Jan 2019, In : JOURNAL OF PEDIATRIC INFECTIOUS DISEASES. 14, 3, p. 136-139 4 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Sexually transmitted infections and behavioral determinants of sexual and reproductive health in the allahabad district (India) based on data from the chlamindia study

Thomas, P. P. M., Yadav, J., Kant, R., Ambrosino, E., Srivastava, S., Batra, G., Dayal, A., Masih, N., Pandey, A., Saha, S., Heijmans, R., Lal, J. A. & Morré, S. A., 2019, In : Microorganisms. 7, 11, 557.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Open Access

The first two cases of candida auris in the Netherlands

Vogelzang, E. H., Weersink, A. J. L., Mansfeld, R. V., Chow, N. A., Meis, J. F. & Dijk, K. V., 2019, In : Journal of Fungi. 5, 4, 91.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The influence of age, gender and race/ethnicity on the composition of the human axillary microbiome

Li, M., Budding, A. E., van der Lugt-Degen, M., du-Thumm, L., Vandeven, M. & Fan, A., 1 Jan 2019, In : International Journal of Cosmetic Science. 41, 4, p. 371-377 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

The potential role for host genetic profiling in screening for chlamydia-associated tubal factor infertility (TFI)—new perspectives

Malogajski, J., Branković, I., Land, J. A., Thomas, P. P. M., Morré, S. A. & Ambrosino, E., 1 Jun 2019, In : Genes. 10, 6, 410.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access