Medical Microbiology and Infection Control

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2016

Microbiological Characteristics of Chlamydia trachomatis and Neisseria gonorrhoeae Infections in South African Women

Dubbink, J. H., de Waaij, D. J., Bos, M., van der Eem, L., Bebear, C., Mbambazela, N., Ouburg, S., Peters, R. P. H. & Morre, S. A., Jan 2016, In : Journal of Clinical Microbiology. 54, 1, p. 200-203

Research output: Contribution to journalArticleAcademicpeer-review

Mycosins Are Required for the Stabilization of the ESX-1 and ESX-5 Type VII Secretion Membrane Complexes

van Winden, V. J. C., Ummels, R., Piersma, S. R., Jimenez, C. R., Korotkov, K. V., Bitter, W. & Houben, E. N. G., 2016, In : mBio. 7, 5

Research output: Contribution to journalArticleAcademicpeer-review

New Genome-Wide Algorithm Identifies Novel In-Vivo Expressed Mycobacterium Tuberculosis Antigens Inducing Human T-Cell Responses with Classical and Unconventional Cytokine Profiles

Coppola, M., van Meijgaarden, K. E., Franken, K. L. M. C., Commandeur, S., Dolganov, G., Kramnik, I., Schoolnik, G. K., Comas, I., Lund, O., Prins, C., van den Eeden, S. J. F., Korsvold, G. E., Oftung, F., Geluk, A. & Ottenhoff, T. H. M., 28 Nov 2016, In : Scientific Reports. 6

Research output: Contribution to journalArticleAcademicpeer-review

Outline of a bacterial filter-based assay to detect beta-lactamases

Wintermans, B. B. & Vandenbroucke-Grauls, C. M. J. E., Jan 2016, In : Journal of Microbiological Methods. 120, p. 29-33

Research output: Contribution to journalArticleAcademicpeer-review

Porous Silicon-Based Biosensors: Towards Real-Time Optical Detection of Target Bacteria in the Food Industry

Massad-Ivanir, N., Shtenberg, G., Raz, N., Gazenbeek, C., Budding, D., Bos, M. P. & Segal, E., 30 Nov 2016, In : Scientific Reports. 6

Research output: Contribution to journalArticleAcademicpeer-review

Potential protective effect of a G>A SNP in the 3 ' UTR of HLA-A for Chlamydia trachomatis symptomatology and severity of infection

Jansen, M. E., Brankovic, I., Spaargaren, J., Ouburg, S. & Morre, S. A., Mar 2016, In : Pathogens and Disease. 74, 2

Research output: Contribution to journalArticleAcademicpeer-review

Prevalence and risk factors for carriage of ESBL-producing Enterobacteriaceae in Amsterdam

Reuland, E. A., Al Naiemi, N., Kaiser, A. M., Heck, M., Kluytmans, J. A. J. W., Savelkoul, P. H. M., Elders, P. J. M. & Vandenbroucke-Grauls, C. M. J. E., Apr 2016, In : Journal of Antimicrobial Chemotherapy. 71, 4, p. 1076-82 7 p.

Research output: Contribution to journalArticleAcademicpeer-review

Progressive disseminated histoplasmosis mimicking a flare of systemic lupus erythematosus: a European case report

van Doorn-Schepens, M. L. M., Peters, E. J., van Vugt, R. M., van der Spoel, J. I. & van Dijk, K., Aug 2016, In : JMM Case Reports. 3, 4, p. e005035

Research output: Contribution to journalArticleAcademicpeer-review

Prophylactic administration of chicken cathelicidin-2 boosts zebrafish embryonic innate immunity

Schneider, V. A. F., van Dijk, A., van der Sar, A. M., Kraaij, M. D., Veldhuizen, E. J. A. & Haagsman, H. P., Jul 2016, In : Developmental & Comparative Immunology. 60, p. 108-114

Research output: Contribution to journalArticleAcademicpeer-review

Protein phosphatase, Mg2+/Mn2+-dependent 1A controls the innate antiviral and antibacterial response of macrophages during HIV-1 and Mycobacterium tuberculosis infection

Sun, J., Schaaf, K., Duverger, A., Wolschendorf, F., Speer, A., Wagner, F., Niederweis, M. & Kutsch, O., 29 Mar 2016, In : Oncotarget. 7, 13, p. 15394-409 16 p.

Research output: Contribution to journalArticleAcademic

Sexual behaviour of women in rural South Africa: a descriptive study

Dubbink, J. H., van der Eem, L., McIntyre, J. A., Mbambazela, N., Jobson, G. A., Ouburg, S., Morre, S. A., Struthers, H. E. & Peters, R. P. H., 12 Jul 2016, In : BMC Public Health. 16

Research output: Contribution to journalArticleAcademicpeer-review

Specific polymorphisms in the vitamin D metabolism pathway are not associated with susceptibility to Chlamydia trachomatis infection in humans

Lanjouw, E., Brankovic, I., Pleijster, J., Spaargaren, J., Hoebe, C. J. P. A., van Kranen, H. J., Ouburg, S. & Morre, S. A., Apr 2016, In : Pathogens and Disease. 74, 3

Research output: Contribution to journalArticleAcademicpeer-review

Stenotrophomonas maltophilia ventilator-associated pneumonia. A retrospective matched case-control study

Scholte, J. B. J., Zhou, T. L., Bergmans, D. C. J. J., Rohde, G. G. U., Winkens, B., Van Dessel, H. A., Dormans, T. P. J., Linssen, C. F. M., Roekaerts, P. M. H. J., Savelkoul, P. H. M. & van Mook, W. N. K. A., 2016, In : Infectious diseases (London, England). 48, 10, p. 738-43 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

The Ag85B protein of the BCG vaccine facilitates macrophage uptake but is dispensable for protection against aerosol Mycobacterium tuberculosis infection

Prendergast, K. A., Counoupas, C., Leotta, L., Eto, C., Bitter, W., Winter, N. & Triccas, J. A., 17 May 2016, In : Vaccine. 34, 23, p. 2608-2615

Research output: Contribution to journalArticleAcademicpeer-review

The diagnostic accuracy of serological tests for Lyme borreliosis in Europe: A systematic review and meta-analysis

Leeflang, M. M. G., Ang, C. W., Berkhout, J., Bijlmer, H. A., Van Bortel, W., Brandenburg, A. H., Van Burgel, N. D., Van Dam, A. P., Dessau, R. B., Fingerle, V., Hovius, J. W. R., Jaulhac, B., Meijer, B., Van Pelt, W., Schellekens, J. F. P., Spijker, R., Stelma, F. F., Stanek, G., Verduyn-Lunel, F., Zeller, H. & 1 othersSprong, H., 25 Mar 2016, In : BMC Infectious Diseases. 16, 1, 140.

Research output: Contribution to journalArticleAcademicpeer-review

The ESX-5 System of Pathogenic Mycobacteria Is Involved In Capsule Integrity and Virulence through Its Substrate PPE10

Ates, L. S., van der Woude, A. D., Bestebroer, J., van Stempvoort, G., Musters, R. J. P., Garcia-Vallejo, J. J., Picavet, D. I., van de Weerd, R., Maletta, M., Kuijl, C. P., van der Wel, N. N. & Bitter, W., Jun 2016, In : PLoS Pathogens. 12, 6, 1005696 .

Research output: Contribution to journalArticleAcademicpeer-review

TLR2, TLR4 and TLR9 genotypes and haplotypes in the susceptibility to and clinical course of Chlamydia trachomatis infections in Dutch women

Verweij, S. P., Karimi, O., Pleijster, J., Lyons, J. M., de Vries, H. J. C., Land, J. A., Morre, S. A. & Ouburg, S., Feb 2016, In : Pathogens and Disease. 74, 1

Research output: Contribution to journalArticleAcademicpeer-review

Total laparoscopic intestinal vaginoplasty as neovaginal reconstruction in an HIV-positive transgender woman

van der Sluis, W. B., Verweij, S. P., Ozer, M., Meijerink, W. J. & Bouman, M-B., Jul 2016, In : International Journal of STD and AIDS. 27, 8, p. 684-686

Research output: Contribution to journalArticleAcademicpeer-review

Travel to Asia and traveller's diarrhoea with antibiotic treatment are independent risk factors for acquiring ciprofloxacin-resistant and extended spectrum β-lactamase-producing Enterobacteriaceae-a prospective cohort study

Reuland, E. A., Sonder, G. J. B., Stolte, I., Al Naiemi, N., Koek, A., Linde, G. B., van de Laar, T. J. W., Vandenbroucke-Grauls, C. M. J. E. & van Dam, A. P., Aug 2016, In : Clinical Microbiology and Infection. 22, 8, p. 731.e1-7

Research output: Contribution to journalArticleAcademicpeer-review

Vaginal high-risk human papillomavirus infection in a cross-sectional study among women of six different ethnicities in Amsterdam, the Netherlands: the HELIUS study

Alberts, C. J., Vos, R. A., Borgdorff, H., Vermeulen, W., van Bergen, J., Bruisten, S. M., Geerlings, S. E., Snijder, M. B., van Houdt, R., Morre, S. A., de Vries, H. J. C., van de Wijgert, J. H. H. M., Prins, M. & van der Loeff, M. F. S., Dec 2016, In : Sexually Transmitted Infections. 92, 8, p. 611-618

Research output: Contribution to journalArticleAcademicpeer-review

Viral-bacterial interactions in the respiratory tract

Bellinghausen, C., Rohde, G. G. U., Savelkoul, P. H. M., Wouters, E. F. M. & Stassen, F. R. M., Dec 2016, In : Journal of General Virology. 97, 12, p. 3089-3102 14 p.

Research output: Contribution to journalArticleAcademicpeer-review

Whole-Genome Multilocus Sequence Typing of Extended-Spectrum-Beta-Lactamase-Producing Enterobacteriaceae

Kluytmans-van den Bergh, M. F. Q., Rossen, J. W. A., Bruijning-Verhagen, P. C. J., Bonten, M. J. M., Friedrich, A. W., Vandenbroucke-Grauls, C. M. J. E., Willems, R. J. L. & Kluytmans, J. A. J. W., Dec 2016, In : Journal of Clinical Microbiology. 54, 12, p. 2919-2927 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

2015

A Dutch nationwide evaluation of serological assays for detection of Borrelia antibodies in clinically well-defined patients

Ang, C. W., Brandenburg, A. H., van Burgel, N. D., Bijlmer, H. A., Herremans, T., Stelma, F., Lunel, F. V. & van Dam, A. P., 2015, In : Diagnostic microbiology and infectious disease. 83, 3, p. 222-228

Research output: Contribution to journalArticleAcademicpeer-review

A genome-wide association study of rheumatoid arthritis without antibodies against citrullinated peptides

Bossini-Castillo, L., de Kovel, C., Kallberg, H., van't Slot, R., Italiaander, A., Coenen, M., Tak, P. P., Posthumus, M. D., Wijmenga, C., Huizinga, T., van der Helm-va Mil, A., Stoeken-Rijsbergen, G., Rodriguez-Rodriguez, L., Balsa, A., Gonzalez-Alvaro, I., Gonzalez-Gay, M. A., Gomez-Vaquero, C., Franke, B., Vermeulen, S., van der Horst-Bruinsma, I. E. & 16 othersDijkmans, B. A. C., Wolbink, G. J., Ophoff, R. A., Maehlen, M. T., van Riel, P., Merriman, M., Klareskog, L., Lie, B. A., Merriman, T., Crusius, J. B. A., Brouwer, E., Martin, J., de Vries, N., Toes, R., Padyukov, L. & Koeleman, B. P. C., 2015, In : Annals of the Rheumatic Diseases. 74, 3, e15.

Research output: Contribution to journalArticleAcademicpeer-review

Allelic imbalance at the HER2/TOP2A locus in breast cancer

Huijsmans, C. J. J., van den Brule, A. J. C., Rigter, H., Poodt, J., van der Linden, J. C., Savelkoul, P. H. M., Hilbink, M. & Hermans, M. H. A., 2015, In : Diagnostic pathology. 10, 56.

Research output: Contribution to journalArticleAcademicpeer-review

A multiplex real-time PCR assay for routine diagnosis of bacterial vaginosis

Kusters, J. G., Reuland, E. A., Bouter, S., Koenig, P. & Dorigo-Zetsma, J. W., 2015, In : European Journal of Clinical Microbiology and Infectious Diseases. 34, 9, p. 1779-1785

Research output: Contribution to journalArticleAcademicpeer-review

A Murine Monoclonal Antibody to Glycogen: Characterization of Epitope-Fine Specificity by Saturation Transfer Difference (STD) NMR Spectroscopy and Its Use in Mycobacterial Capsular alpha-Glucan Research

van de Weerd, R., Berbis, M. A., Sparrius, M., Maaskant, J. J., Boot, M., Paauw, N. J., de Vries, N., Boon, L., Baba, O., Canada, F. J., Geurtsen, J. J. G., Jimenez-Barbero, J. & Appelmelk, B. J., 2015, In : ChemBioChem. 16, 6, p. 977-989

Research output: Contribution to journalArticleAcademicpeer-review

Analyse van patientstromen. De basis voor regionale bestrijding van gevaarlijke infecties

Donker, T., Ciccolini, M., Wallinga, J., Kluytmans, J. A. J. W., Grundmann, H. & Friedrich, A. W., 2015, In : Nederlands Tijdschrift voor Geneeskunde. 159, A8468.

Research output: Contribution to journalArticleProfessional

A new dehydratase conferring innate resistance to thiacetazone and intra-amoebal survival of Mycobacterium smegmatis

Carrere-Kremer, S., Blaise, M., Singh, V. K., Alibaud, L., Tuaillon, E., Halloum, I., van de Weerd, R., Guerardel, Y., Drancourt, M., Takiff, H., Geurtsen, J. & Kremer, L., 2015, In : Molecular Microbiology. 96, 5, p. 1085-1102

Research output: Contribution to journalArticleAcademicpeer-review

Animal models of tuberculosis: Zebrafish

van Leeuwen, L. M., van der Sar, A. M. & Bitter, W., 2015, In : Cold Spring Harbor perspectives in medicine. 5, 3, a018580.

Research output: Contribution to journalArticleAcademicpeer-review

An outbreak of colistin-resistant Klebsiella pneumoniae carbapenemase-producing Klebsiella pneumoniae in the Netherlands (July to December 2013), with inter-institutional spread

Weterings, V., Zhou, K., Rossen, J., van Stenis, D., Thewessen, E., Kluytmans, J. & Veenemans, J., 2015, In : European Journal of Clinical Microbiology and Infectious Diseases. 34, 8, p. 1647-1655

Research output: Contribution to journalArticleAcademicpeer-review

Antibioticaresistentie en ouderenzorg

Kluijtmans, J. A. J. W., 2015, In : Tijdschrift voor Ouderengeneeskunde. 2015, 2

Research output: Contribution to journalArticleProfessional

Antibiotic Treatment Strategies for Community-Acquired Pneumonia in Adults

Postma, D. F., van Werkhoven, C. H., van Elden, L. J., Thijsen, S. F., Hoepelman, A. I., Kluytmans, J. A. J. W., Boersma, W. G., Compaijen, C. J., van der Wall, E., Prins, J. M., Oosterheert, J. J. & Bonten, MJ., 2015, In : New England Journal of Medicine. 372, 14, p. 1312-1323

Research output: Contribution to journalArticleAcademicpeer-review

Can the Hydroxyapatite-Coated Skin-Penetrating Abutment for Bone Conduction Hearing Implants Integrate with the Surrounding Skin?

van Hoof, M., Wigren, S., Duimel, H., Savelkoul, P. H. M., Flynn, M. & Stokroos, R. J., 2015, In : Frontiers in surgery. 2, 45.

Research output: Contribution to journalArticleAcademicpeer-review

Central America in Transition: From Maize to Wheat. Challenges and Opportunities

Pena, A. S. & Crusius, J. B. A., 2015, In : Nutrients. 7, 9, p. 7163-7171

Research output: Contribution to journalArticleAcademicpeer-review

Community-associated methicillin-resistant Staphylococcus aureus transmission in households of infected cases: a pooled analysis of primary data from three studies across international settings

Knox, J., van Rijen, M., Uhlemann, A. C., Miller, M., Hafer, C., Vavagiakis, P., Shi, Q., Johnson, P. D. R., Coombs, G., Kluytmans-van d Bergh, M., Kluytmans, J., Bennett, C. M. & Lowy, F. D., 2015, In : Epidemiology and Infection. 143, 2, p. 354-365

Research output: Contribution to journalArticleAcademicpeer-review

Comparison of GMT presto assay and Roche cobase (R) 4800 CT/NG assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in dry swabs

de Waaij, D. J., Dubbink, J. H., Peters, R. P. H., Ouburg, S. & Morre, S. A., 2015, In : Journal of Microbiological Methods. 118, p. 70-74

Research output: Contribution to journalArticleAcademicpeer-review

CpG DNA analysis of bacterial STDs

Singer, M., de Waaij, D. J., Morre, S. A. & Ouburg, S., 2015, In : BMC Infectious Diseases. 15, 273.

Research output: Contribution to journalArticleAcademicpeer-review

C-reactive protein polymorphisms influence serum CRP-levels independent of disease activity in ankylosing spondylitis

Claushuis, T. A. M., de Vries, M. K., van der Weijden, M. A. C., Visman, I. M., Nurmohamed, M. T., Twisk, J. W. R., van der Horst-Bruinsma, I. E. & Crusius, J. B. A., 2015, In : Clinical and Experimental Rheumatology. 33, 2, p. 159-165

Research output: Contribution to journalArticleAcademicpeer-review

Cross-border comparison of the Dutch and German guidelines on multidrug-resistant Gram-negative microorganisms

Muller, J., Voss, A., Kock, R., Sinha, B., Rossen, J. W., Kaase, M., Mielke, M., Daniels-Haardt, I., Jurke, A., Hendrix, R., Kluytmans, J. A. J. W., Kluytmans-van d Bergh, M. F., Pulz, M., Herrmann, J., Kern, W. V., Wendt, C. & Friedrich, A. W., 2015, In : Antimicrobial Resistance and Infection Control. 4, 7.

Research output: Contribution to journalArticleAcademicpeer-review

Determining the genome-wide kinship coefficient seems unhelpful in distinguishing consanguineous couples with a high versus low risk for adverse reproductive outcome

Kelmemi, W., Teeuw, M. E., Bochdanovits, Z., Ouburg, S., Jonker, M. A., Alkuraya, F., Hashem, M., Kayserili, H., van Haeringen, A., Sheridan, E., Masri, A., Cobben, J. M., Rizzu, P., Kostense, P. J., Dommering, C. J., Henneman, L., Bouhamed-Chaabouni, H., Heutink, P., ten Kate, L. P. & Cornel, M. C., 2015, In : BMC Medical Genetics. 16, 50.

Research output: Contribution to journalArticleAcademicpeer-review

De zorg in momentopnames

Kluytmans, J. A. J. W., 2015, In : Nederlands Tijdschrift voor Geneeskunde. 159, A9063.

Research output: Contribution to journalArticleProfessional

Diagnostiek van lymeborreliose

Ang, C. W. & Wolfs, T. F. W., 2015, In : Huisarts en Wetenschap. 58, 5, p. 264-268

Research output: Contribution to journalArticleProfessional

Diet drives quick changes in the metabolic activity and composition of human gut microbiota in a validated in vitro gut model

Aguirre, M., Eck, A., Koenen, M. E., Savelkoul, P. H. M., Budding, A. E. & Venema, K., 27 Oct 2015, In : Research in Microbiology. 167, 2, p. 114-25 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Dispersion of the HIV-1 Epidemic in Men Who Have Sex with Men in the Netherlands: A Combined Mathematical Model and Phylogenetic Analysis

ATHENA observational cohort, 1 Nov 2015, In : PLoS Medicine. 12, 11, e1001898.

Research output: Contribution to journalArticleAcademicpeer-review

Effects of Reducing Antimicrobial Use and Applying a Cleaning and Disinfection Program in Veal Calf Farming: Experiences from an Intervention Study to Control Livestock-Associated MRSA

Dorado-Garcia, A., Graveland, H., Bos, M. E. H., Verstappen, K. M., Van Cleef, B. A. G. L., Kluytmans, J. A. J. W., Wagenaar, J. A. & Heederik, D. J. J., 2015, In : PLoS ONE. 10, 8, e0135826.

Research output: Contribution to journalArticleAcademicpeer-review

Essential Role of the ESX-5 Secretion System in Outer Membrane Permeability of Pathogenic Mycobacteria.

Ates, L. S., Ummels, R., Commandeur, S., van de Weerd, R., Sparrius, M., Weerdenburg, E., Alber, M., Kalscheuer, R., Piersma, S. R., Abdallah, A., Abd El Ghany, M., Abdel-Haleem, A. M., Pain, A., Jimenez, C. R., Bitter, W. & Houben, E. N. G., 2015, In : PLoS Genetics. 4, 11, 5.

Research output: Contribution to journalArticleAcademicpeer-review

Evaluation of an optimal preparation of human standardized fecal inocula for in vitro fermentation studies

Aguirre, M., Eck Hauer, A., Koenen, M. E., Savelkoul, P. H. M., Budding, A. E. & Venema, K., 2015, In : Journal of Microbiological Methods. 117, p. 78-84

Research output: Contribution to journalArticleAcademicpeer-review

Evaluation of Approaches to Monitor Staphylococcus aureus Virulence Factor Expression during Human Disease

Rozemeijer, W., Fink, P., Rojas, E., Jones, C. H., Pavliakova, D., Giardina, P., Murphy, E., Liberator, P., Jiang, Q., Girgenti, D., Peters, R. P. H., Savelkoul, P. H. M., Jansen, K. U., Anderson, A. S. & Kluytmans, J., 2015, In : PLoS ONE. 10, 2, e0116945.

Research output: Contribution to journalArticleAcademicpeer-review