Research Output 1981 2020

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2020

Breast Implant Prevalence in the Dutch Female Population Assessed by Chest Radiographs

de Boer, M., van Middelkoop, M., Hauptmann, M., van der Bijl, N., Bosmans, J. A. W., Hendriks-Brouwer, N., Schop, S. J., de Boer, J. P., Hijmering, N. J., Overbeek, L. I. H., Lobbes, M. B. I., Klazen, C. A. H., de Jong, D., Rakhorst, H. A., van der Hulst, R. R. W. J. & van Leeuwen, F. E., 2020, In : Aesthetic Surgery Journal. 40, 2, p. 156-164

Research output: Contribution to journalArticleAcademicpeer-review

Open Access
Open Access

Downstream Influence of Coronary Stenoses on Microcirculatory Remodeling: A Histopathology Study

de Waard, G. A., Hollander, M. R., Ruiter, D., ten Bokkel Huinink, T., Meer, R., van der Hoeven, N. W., Meinster, E., Beliën, J. A. M., Niessen, H. W. & van Royen, N., 2020, In : Arteriosclerosis, Thrombosis, and Vascular Biology. 40, 1, p. 230-238

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Expression of p16 and HPV E4 on biopsy samples and methylation of FAM19A4 and miR124-2 on cervical cytology samples in the classification of cervical squamous intraepithelial lesions

Leeman, A., Jenkins, D., del Pino, M., Ordi, J., Torné, A., Doorbar, J., Meijer, C. J. L. M., van Kemenade, F. J. & Quint, W. G. V., 1 Jan 2020, In : Cancer Medicine.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

IBD-Associated Dysplastic Lesions Show More Chromosomal Instability Than Sporadic Adenomas

Wanders, L. K., Cordes, M., Voorham, Q., Sie, D., de Vries, S. D., d’Haens, G. R. A. M., de Boer, N. K. H., Ylstra, B., van Grieken, N. C. T., Meijer, G. A., Dekker, E. & Carvalho, B., Feb 2020, In : Inflammatory Bowel Diseases. 26, 2, p. 167-180

Research output: Contribution to journalArticleAcademicpeer-review

Molecular and clonal evolution in recurrent metastatic gliosarcoma

Anderson, K. J., Tan, A. C., Parkinson, J., Back, M., Kastelan, M., Newey, A., Brewer, J., Wheeler, H., Hudson, A. L., Amin, S. B., Johnson, K. C., Barthel, F. P., Verhaak, R. G. W. & Khasraw, M., 1 Feb 2020, In : Cold Spring Harbor molecular case studies. 6, 1, a004671.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

No evidence for cell-to-cell transmission of the unfolded protein response in cell culture

van Ziel, A. M., Wolzak, K., Nölle, A., Hoetjes, P. J., Berenjeno-Correa, E., van Anken, E., Struys, E. A. & Scheper, W., Jan 2020, In : Journal of Neurochemistry. 152, 2, p. 208-220

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

p120-catenin-dependent collective brain infiltration by glioma cell networks

Gritsenko, P. G., Atlasy, N., Dieteren, C. E. J., Navis, A. C., Venhuizen, J-H., Veelken, C., Schubert, D., Acker-Palmer, A., Westerman, B. A., Wurdinger, T., Leenders, W., Wesseling, P., Stunnenberg, H. G. & Friedl, P., 2020, In : Nature Cell Biology. 22, 1, p. 97-107

Research output: Contribution to journalArticleAcademicpeer-review

Perivascular Adipose Tissue Controls Insulin-Stimulated Perfusion, Mitochondrial Protein Expression and Glucose Uptake in Muscle Through Adipomuscular Arterioles

Turaihi, A. H., Serné, E. H., Molthoff, C. F. M., Koning, J. J., Knol, J., Niessen, H. W., Jose Th Goumans, M., van Poelgeest, E. M., Yudkin, J. S., Smulders, Y. M., Jimenez, C. R., van Hinsbergh, V. W. & Eringa, E. C., 31 Jan 2020, In : Diabetes.

Research output: Contribution to journalArticleAcademicpeer-review

2019

[89Zr]Zr-cetuximab PET/CT as biomarker for cetuximab monotherapy in patients with RAS wild-type advanced colorectal cancer

van Helden, E. J., Elias, S. G., Gerritse, S. L., van Es, S. C., Boon, E., Huisman, M. C., van Grieken, N. C. T., Dekker, H., van Dongen, G. A. M. S., Vugts, D. J., Boellaard, R., van Herpen, C. M. L., de Vries, E. G. E., Oyen, W. J. G., Brouwers, A. H., Verheul, H. M. W., Hoekstra, O. S. & Menke-van der Houven van Oordt, C. W., 2019, In : European Journal of Nuclear Medicine and Molecular Imaging.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

7T MRI allows detection of disturbed cortical lamination of the medial temporal lobe in patients with Alzheimer's disease

Kenkhuis, B., Jonkman, L. E., Bulk, M., Buijs, M., Boon, B. D. C., Bouwman, F. H., Geurts, J. J. G., van de Berg, W. D. J. & van der Weerd, L., 1 Jan 2019, In : NeuroImage: Clinical. 21, 1 p., 101665.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

ACE: Absolute Copy number Estimation from low-coverage whole-genome sequencing data

Poell, J. B., Mendeville, M., Sie, D., Brink, A., Brakenhoff, R. H. & Ylstra, B., 15 Aug 2019, In : Bioinformatics. 35, 16, p. 2847-2849

Research output: Contribution to journalArticleAcademicpeer-review

A CRISPR-Cas9 screen identifies essential CTCF anchor sites for estrogen receptor-driven breast cancer cell proliferation

Korkmaz, G., Manber, Z., Lopes, R., Prekovic, S., Schuurman, K., Kim, Y., Teunissen, H., Flach, K., Wit, E. D., Galli, G. G., Zwart, W., Elkon, R. & Agami, R., 10 Oct 2019, In : Nucleic Acids Research. 47, 18, p. 9557-9572 16 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

ALK immunohistochemistry positive, FISH negative NSCLC is infrequent, but associated with impaired survival following treatment with crizotinib

Thunnissen, E., Lissenberg-Witte, B. I., van den Heuvel, M. M., Monkhorst, K., Skov, B. G., Sørensen, J. B., Mellemgaard, A., Dingemans, A. M. C., Speel, E. J. M., de Langen, A. J., Hashemi, S. M. S., Bahce, I., van der Drift, M. A., Looijen-Salamon, M. G., Gosney, J., Postmus, P. E., Samii, S. M. S., Duplaquet, F., Weynand, B., Durando, X. & 15 othersPenault-Llorca, F., Finn, S., Grady, A. O., Oz, B., Akyurek, N., Buettner, R., Wolf, J., Bubendorf, L., Duin, S., Marondel, I., Heukamp, L. C., Timens, W., Schuuring, E. M. D., Pauwels, P. & Smit, E. F., 2019, In : Lung Cancer. 138, p. 13-18 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Apolipoprotein D: a potential biomarker for cerebral amyloid angiopathy

Kuiperij, H. B., Hondius, D. C., Kersten, I., Versleijen, A. A. M., Rozemuller, A. J. M., Greenberg, S. M., Schreuder, F. H. B. M., Klijn, C. J. M. & Verbeek, M. M., 1 Jan 2019, In : Neuropathology and Applied Neurobiology.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A quantitative neuropathological assessment of translocator protein expression in multiple sclerosis

Nutma, E., Stephenson, J. A., Gorter, R. P., de Bruin, J., Boucherie, D. M., Donat, C. K., Breur, M., van der Valk, P., Matthews, P. M., Owen, D. R. & Amor, S., 1 Nov 2019, In : Brain : a journal of neurology. 142, 11, p. 3440-3455 16 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A retrospective cohort study of PD-L1 prevalence, molecular associations and clinical outcomes in patients with NSCLC: Results from the European Thoracic Oncology Platform (ETOP) Lungscape Project

Kerr, K. M., Thunnissen, E., Dafni, U., Finn, S. P., Bubendorf, L., Soltermann, A., Verbeken, E., Biernat, W., Warth, A., Marchetti, A., Speel, E-J. M., Pokharel, S., Quinn, A. M., Monkhorst, K., Navarro, A., Madsen, L. B., Radonic, T., Wilson, J., de Luca, G., Gray, S. G. & 17 othersCheney, R., Savic, S., Martorell, M., Muley, T., Baas, P., Meldgaard, P., Blackhall, F., Dingemans, A-M., Dziadziuszko, R., Vansteenkiste, J., Weder, W., Polydoropoulou, V., Geiger, T., Kammler, R., Peters, S., Stahel, R. & Lungscape Consortium, 1 May 2019, In : Lung Cancer. 131, p. 95-103

Research output: Contribution to journalArticleAcademicpeer-review

Aspirin intake in the morning is associated with suboptimal platelet inhibition, as measured by serum Thromboxane B2, during infarct-prone early-morning hours

Racca, C., Fuijkschot, W. W., van Diemen, J. J. K., Spit, K., Bonten, T. N., Numans, M. E., van der Bom, J. G., Smulders, Y. M. & Thijs, A., 2019, In : Platelets. 30, 7, p. 871-877

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Astrocytic ceramide as possible indicator of neuroinflammation

de Wit, N. M., den Hoedt, S., Martinez-Martinez, P., Rozemuller, A. J., Mulder, M. T. & de Vries, H. E., 25 Feb 2019, In : Journal of Neuroinflammation. 16, 1, 48.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

A two-gene methylation signature for the diagnosis of bladder cancer in urine

Bosschieter, J., Nieuwenhuijzen, J. A., Hentschel, A., van Splunter, A. P., Segerink, L. I., Vis, A. N., Wilting, S. M., Lissenberg-Witte, B. I., A van Moorselaar, R. J. & Steenbergen, R. D., Feb 2019, In : Epigenomics. 11, 3, p. 337-347 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Autoimmune encephalomyelitis in NOD mice is not initially a progressive multiple sclerosis model

Amor, S., 2019, (Accepted/In press) In : Annals of Clinical and Translational Neurology.

Research output: Contribution to journalArticleAcademicpeer-review

Best Practices Recommendations for Diagnostic Immunohistochemistry in Lung Cancer

Yatabe, Y., Dacic, S., Borczuk, A. C., Warth, A., Russell, P. A., Lantuejoul, S., Beasley, M. B., Thunnissen, E., Pelosi, G., Rekhtman, N., Bubendorf, L., Mino-Kenudson, M., Yoshida, A., Geisinger, K. R., Noguchi, M., Chirieac, L. R., Bolting, J., Chung, J-H., Chou, T-Y., Chen, G. & 12 othersPoleri, C., Lopez-Rios, F., Papotti, M., Sholl, L. M., Roden, A. C., Travis, W. D., Hirsch, F. R., Kerr, K. M., Tsao, M-S., Nicholson, A. G., Wistuba, I. & Moreira, A. L., 2019, In : Journal of Thoracic Oncology. 14, 3, p. 377-407

Research output: Contribution to journalArticleAcademicpeer-review

Biallelic variants in LARS2 and KARS cause deafness and (ovario)leukodystrophy

van der Knaap, M. S., Bugiani, M., Mendes, M. I., Riley, L. G., Smith, D. E. C., Rudinger-Thirion, J., Frugier, M., Breur, M., Crawford, J., van Gaalen, J., Schouten, M., Willems, M., Waisfisz, Q., Mau-Them, F. T., Rodenburg, R. J., Taft, R. J., Keren, B., Christodoulou, J., Depienne, C., Simons, C. & 2 othersSalomons, G. S. & Mochel, F., 12 Mar 2019, In : Neurology. 92, 11, p. E1225-E1237

Research output: Contribution to journalArticleAcademicpeer-review

Biochemical Changes in Irradiated Oral Mucosa: A FTIR Spectroscopic Study

Ukkonen, H., Vuokila, S., Mikkonen, J. J. W., Dekker, H., Schulten, E. A. J. M., Bloemena, E., Koistinen, A., Valdez, T. A., Kullaa, A. M. & Singh, S. P., 13 Jan 2019, In : Biosensors. 9, 1

Research output: Contribution to journalArticleAcademicpeer-review

Biochemically Silent Sympathetic Paraganglioma, Pheochromocytoma, or Metastatic Disease in SDHD Mutation Carriers

Dreijerink, K. M. A., Rijken, J. A., Compaijen, C. J., Timmers, H. J. L. M., van der Horst-Schrivers, A. N. A., van Leeuwaarde, R. S., van Dam, P. S., Leemans, C. R., van Dam, E. W. C. M., Dickhoff, C., Dommering, C. J., de Graaf, P., Zwezerijnen, G. J. C., van der Valk, P., Menke-van der Houven van Oordt, C. W., Hensen, E. F., Corssmit, E. P. M. & Eekhoff, E. M. W., 1 Nov 2019, In : The Journal of clinical endocrinology and metabolism. 104, 11, p. 5421-5426 6 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Can post-mortem MRI be used as a proxy for in vivo? A case study

Boon, BDC., 24 Oct 2019, In : Brain Communications. 1, 1

Research output: Contribution to journalArticleAcademicpeer-review

CCND2 and CCND3 hijack immunoglobulin light-chain enhancers in cyclin D12 mantle cell lymphoma

Martín-Garcia, D., Navarro, A., Valdés-Mas, R., Clot, G., Gutiérrez-Abril, J., Prieto, M., Ribera-Cortada, I., Woroniecka, R., Rymkiewicz, G., Bens, S., de Leval, L., Rosenwald, A., Ferry, J. A., Hsi, E. D., Fu, K., Delabie, J., Weisenburger, D., de Jong, D., Climent, F., O'Connor, S. J. & 17 othersSwerdlow, S. H., Torrents, D., Beltran, S., Espinet, B., González-Farré, B., Veloza, L., Costa, D., Matutes, E., Siebert, R., Ott, G., Quintanilla-Martinez, L., Jaffe, E. S., López-Otín, C., Salaverria, I., Puente, X. S., Campo, E. & Beà, S., 1 Jan 2019, In : Blood. 133, 9, p. 940-951 12 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

CD31-positive microvessel density within adenomas of Lynch Syndrome patients is similar compared to adenomas of non-Lynch patients

Vleugels, J. L. A., van Neerven, S. M., van Leerdam, M. E., Wanders, L. K., de Wit, M., Carvalho, B., Delis-van Diemen, P. M., Kallenberg, F. G. J., Vermeulen, L., Beliën, J. A., East, J. E., Meijer, G. A. & Dekker, E., May 2019, In : Endoscopy International Open. 7, 5, p. E701-E707

Research output: Contribution to journalArticleAcademicpeer-review

Cervical cancer detection by DNA methylation analysis in urine

Snoek, B. C., Splunter, A. P. V., Bleeker, M. C. G., Ruiten, M. C. V., Heideman, D. A. M., Rurup, W. F., Verlaat, W., Schotman, H., Gent, M. V., Trommel, N. E. V. & Steenbergen, R. D. M., 28 Feb 2019, In : Scientific Reports. 9, 1, p. 3088

Research output: Contribution to journalArticleAcademicpeer-review

Circulating tumor DNA analysis: clinical implications for colorectal cancer patients. A systematic review

Bach, S., Sluiter, N. R., Beagan, J., Mekke, J. M., Ket, J. C. F., van Grieken, N. C. T., Steenbergen, R. D. M., Ylstra, B., Kazemier, G. & Tuynman, J. B., 19 Jun 2019, In : JNCI Cancer Spectrum. 3, 3, pkz042.

Research output: Contribution to journalArticleAcademicpeer-review

Circulating tumor DNA quantity is related to tumor volume and both predict survival in metastatic pancreatic ductal adenocarcinoma

Strijker, M., Soer, E. C., de Pastena, M., Creemers, A., Balduzzi, A., Beagan, J. J., Busch, O. R., van Delden, O. M., Halfwerk, H., van Hooft, J. E., van Lienden, K. P., Marchegiani, G., Meijer, S. L., van Noesel, C. J., Reinten, R. J., Roos, E., Schokker, S., Verheij, J., van de Vijver, M. J., Waasdorp, C. & 6 othersWilmink, J. W., Ylstra, B., Besselink, M. G., Bijlsma, M. F., Dijk, F. & van Laarhoven, H. W., 2019, (Accepted/In press) In : International Journal of Cancer. 146, 5, p. 1445-1456

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Clear Cell Odontogenic Carcinoma: Occurrence of EWSR1-CREB1 as Alternative Fusion Gene to EWSR1-ATF1

Vogels, R., Baumhoer, D., van Gorp, J., Eijkelenboom, A., Verdijk, M., van Cleef, P., Bloemena, E., Slootweg, P. J., Lohman, B., Debiec-Rychter, M. & Flucke, U., 1 Jun 2019, In : Head and neck pathology. 13, 2, p. 225-230

Research output: Contribution to journalArticleAcademicpeer-review

Clinical performance of the HPV-Risk assay on cervical samples in SurePath medium using the VALGENT-4 panel

Heideman, D. A. M., Xu, L., Hesselink, A. T., Doorn, S., Ejegod, D. M., Pedersen, H., Quint, W. G. V., Bonde, J. & Arbyn, M., 1 Dec 2019, In : Journal of Clinical Virology. 121, 104201.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Clinicopathologic and molecular features of intracranial desmoplastic small round cell tumors

Lee, J. C., Villanueva-Meyer, J. E., Ferris, S. P., Cham, E. M., Zucker, J., Cooney, T., Gilani, A., Kleinschmidt-DeMasters, B. K., Trembath, D., Mafra, M., Chiang, J., Ellison, D. W., Cho, S-J., Horvai, A. E., van Ziffle, J., Onodera, C., Devine, P., Grenert, J. P., de Voijs, C. M. A., van Blokland, W. T. M. & 11 othersde Leng, W. W. J., Ploegmakers, M. J., Flucke, U., Pekmezci, M., Bollen, A. W., Tihan, T., Koelsche, C., von Deimling, A., Wesseling, P., Solomon, D. A. & Perry, A., 14 Dec 2019, In : Brain Pathology.

Research output: Contribution to journalArticleAcademicpeer-review

Clonality analysis of pulmonary tumors by genome-wide copy number profiling

Vincenten, J. P. L., van Essen, H. F., Lissenberg-Witte, B. I., Bulkmans, N. W. J., Krijgsman, O., Sie, D., Eijk, P. P., Smit, E. F., Ylstra, B. & Thunnissen, E., 2019, In : PLoS ONE. 14, 10, e0223827.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Colorectal metastasis to the gallbladder mimicking a primary gallbladder malignancy: histopathological and molecular characteristics

de Bitter, T. J. J., van der Linden, R. L. A., van Vliet, S., Weren, F., Sie, D., Ylstra, B., van der Linden, H. C., Knijn, N., Ligtenberg, M. J. L., van der Post, R. S., Simmer, F. & Nagtegaal, I. D., 1 Jan 2019, In : Histopathology. 75, 3, p. 394-404 11 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen

Menden, M. P., Wang, D., Mason, M. J., Szalai, B., Bulusu, K. C., Guan, Y., Yu, T., Kang, J., Jeon, M., Wolfinger, R., Nguyen, T., Zaslavskiy, M., AstraZeneca-Sanger Drug Combination DREAM Consortium, Jang, I. S., Ghazoui, Z., Ahsen, M. E., Vogel, R., Neto, E. C., Norman, T., Tang, E. K. Y. & 7 othersGarnett, M. J., Veroli, G. Y. D., Fawell, S., Stolovitzky, G., Guinney, J., Dry, J. R. & Saez-Rodriguez, J., 1 Dec 2019, In : Nature Communications. 10, 1, 2674.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Comparison of Systematic Video Documentation with Narrative Operative Report in Colorectal Cancer Surgery

van de Graaf, F. W., Lange, M. M., Spakman, J. I., van Grevenstein, W. M. U., Lips, D., de Graaf, E. J. R., Menon, A. G. & Lange, J. F., 1 May 2019, In : JAMA Surgery. 154, 5, p. 381-389 9 p.

Research output: Contribution to journalArticleAcademicpeer-review

Complementarity between miRNA expression analysis and DNA methylation analysis in hrHPV-positive cervical scrapes for the detection of cervical disease

Babion, I., De Strooper, L. M. A., Luttmer, R., Bleeker, M. C. G., Meijer, C. J. L. M., Heideman, D. A. M., Wilting, S. M. & Steenbergen, R. D. M., 3 Jun 2019, In : Epigenetics. 14, 6, p. 558-567 10 p.

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Constitutively active GSK3β as a means to bolster dendritic cell functionality in the face of tumour-mediated immune suppression

Gonzalez, M. L., Oosterhoff, D., Lindenberg, J. J., Milenova, I., Lougheed, S. M., Martianez, T., Dekker, H., Quixabeira, D. C. A., Hangalapura, B., Joore, J., Piersma, S. R., Cervera-Carrascon, V., Santos, J. M., Scheper, R. J., Verheul, H. M. W., Jimenez, C. R., Van De Ven, R., Hemminki, A., Van Beusechem, V. W. & De Gruijl, T. D., 1 Jan 2019, In : OncoImmunology. 8, 10

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

CRP-guided antibiotic treatment in acute exacerbations of COPD in hospital admissions

Prins, H. J., Duijkers, R., van der Valk, P., Schoorl, M., Daniels, J. M. A., van der Werf, T. S. & Boersma, W. G., 2019, In : The European respiratory journal. 53, 5

Research output: Contribution to journalArticleAcademicpeer-review

Open Access

Cutaneous Toxicity After Chemoradiotherapy and PD-L1 Inhibition in Two Patients with Esophageal Adenocarcinoma: More than Meets the Eye

van den Ende, T., Menting, S. P., Ambarus, C. A., van Oijen, M. G. H. & van Laarhoven, H. W. M., 1 Apr 2019, In : Oncologist. 24, 4, p. e149-e153

Research output: Contribution to journalArticleAcademicpeer-review