TY - JOUR
T1 - Computational analysis of flow cytometry data in hematological malignancies
T2 - future clinical practice?
AU - Duetz, Carolien
AU - Bachas, Costa
AU - Westers, Theresia M
AU - van de Loosdrecht, Arjan A
N1 - Funding Information:
This study was supported in part by research funding from MDS-RIGHT, which has received funding from the European Union's Horizon 2020 research and innovation program under grant agreement No 634789 - Providing the right care to the right patient with MyeloDysplastic Syndrome at the right time to Arjan A. van de Loosdrecht
Funding Information:
This study was supported in part by research funding from MDS-RIGHT, which has received funding from the European Union’s Horizon 2020 research and innovation program under grant agreement No 634789 - ‘Providing the right care to the right patient with MyeloDysplastic Syndrome at the right time’ to Arjan A. van de Loosdrecht.
Publisher Copyright:
Copyright © 2020 Wolters Kluwer Health, Inc. All rights reserved.
Copyright:
Copyright 2020 Elsevier B.V., All rights reserved.
PY - 2020/3/1
Y1 - 2020/3/1
N2 - PURPOSE OF REVIEW: This review outlines the advancements that have been made in computational analysis for clinical flow cytometry data in hematological malignancies.RECENT FINDINGS: In recent years, computational analysis methods have been applied to clinical flow cytometry data of hematological malignancies with promising results. Most studies combined dimension reduction (principle component analysis) or clustering methods (FlowSOM, generalized mixture models) with machine learning classifiers (support vector machines, random forest). For diagnosis and classification of hematological malignancies, many studies have reported results concordant with manual expert analysis, including B-cell chronic lymphoid leukemia detection and acute leukemia classification. Other studies, e.g. concerning diagnosis of myelodysplastic syndromes and classification of lymphoma, have shown to be able to increase diagnostic accuracy. With respect to treatment response monitoring, studies have focused on, for example, computational minimal residual disease detection in multiple myeloma and posttreatment classification of healthy or diseased in acute myeloid leukemia. The results of these studies are encouraging, although accurate relapse prediction remains challenging. To facilitate clinical implementation, collaboration and (prospective) validation in multicenter setting are necessary.SUMMARY: Computational analysis methods for clinical flow cytometry data hold the potential to increase ease of use, objectivity and accuracy in the clinical work-up of hematological malignancies.
AB - PURPOSE OF REVIEW: This review outlines the advancements that have been made in computational analysis for clinical flow cytometry data in hematological malignancies.RECENT FINDINGS: In recent years, computational analysis methods have been applied to clinical flow cytometry data of hematological malignancies with promising results. Most studies combined dimension reduction (principle component analysis) or clustering methods (FlowSOM, generalized mixture models) with machine learning classifiers (support vector machines, random forest). For diagnosis and classification of hematological malignancies, many studies have reported results concordant with manual expert analysis, including B-cell chronic lymphoid leukemia detection and acute leukemia classification. Other studies, e.g. concerning diagnosis of myelodysplastic syndromes and classification of lymphoma, have shown to be able to increase diagnostic accuracy. With respect to treatment response monitoring, studies have focused on, for example, computational minimal residual disease detection in multiple myeloma and posttreatment classification of healthy or diseased in acute myeloid leukemia. The results of these studies are encouraging, although accurate relapse prediction remains challenging. To facilitate clinical implementation, collaboration and (prospective) validation in multicenter setting are necessary.SUMMARY: Computational analysis methods for clinical flow cytometry data hold the potential to increase ease of use, objectivity and accuracy in the clinical work-up of hematological malignancies.
KW - Computational
KW - Diagnosis
KW - Flow cytometry
KW - Hematology
KW - Minimal residual disease
KW - Relapse
UR - http://www.scopus.com/inward/record.url?scp=85079023271&partnerID=8YFLogxK
U2 - 10.1097/CCO.0000000000000607
DO - 10.1097/CCO.0000000000000607
M3 - Review article
C2 - 31876546
VL - 32
SP - 162
EP - 169
JO - Current Opinion in Oncology
JF - Current Opinion in Oncology
SN - 1040-8746
IS - 2
ER -